Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 RNU1-89P-201ENST00000384592 164 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 MIR561-201ENST00000385216 97 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 RNU6-159P-201ENST00000391080 106 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 AC017079.2-201ENST00000416102 485 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 AC112220.1-201ENST00000434628 355 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.97□□□□□ -1.93
PF4V1P10720 AC103975.1-201ENST00000482506 483 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 AC090096.1-201ENST00000489168 390 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.97□□□□□ -1.93
PF4V1P10720 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.97□□□□□ -1.93
PF4V1P10720 HSPE1P20-201ENST00000538133 289 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 AL442663.2-201ENST00000554385 511 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 AC020661.2-201ENST00000560114 134 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 AL356055.1-201ENST00000602528 446 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 AC087588.2-201ENST00000617667 426 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 AC005562.2-201ENST00000618264 111 ntBASIC2.97□□□□□ -1.93
PF4V1P10720 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.97□□□□□ -1.93
PF4V1P10720 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.97□□□□□ -1.93
PF4V1P10720 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PF4V1P10720 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PF4V1P10720 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.97□□□□□ -1.93
PF4V1P10720 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
PF4V1P10720 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
PF4V1P10720 Y_RNA.39-201ENST00000362620 98 ntBASIC2.96□□□□□ -1.94
PF4V1P10720 RNU4-42P-201ENST00000364738 142 ntBASIC2.96□□□□□ -1.94
PF4V1P10720 XGY1-201ENST00000381172 446 ntBASIC2.96□□□□□ -1.94
PF4V1P10720 RNU6-546P-201ENST00000383991 107 ntBASIC2.96□□□□□ -1.94
PF4V1P10720 MIR487A-201ENST00000385009 80 ntBASIC2.96□□□□□ -1.94
PF4V1P10720 HLFP1-201ENST00000402375 499 ntBASIC2.96□□□□□ -1.94
PF4V1P10720 Y_RNA.605-201ENST00000410577 105 ntBASIC2.96□□□□□ -1.94
PF4V1P10720 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.96□□□□□ -1.94
PF4V1P10720 RPL23AP83-201ENST00000434984 473 ntBASIC2.96□□□□□ -1.94
PF4V1P10720 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.96□□□□□ -1.94
PF4V1P10720 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.96□□□□□ -1.94
PF4V1P10720 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.96□□□□□ -1.94
PF4V1P10720 AC104619.4-201ENST00000510773 249 ntBASIC2.96□□□□□ -1.94
PF4V1P10720 RNU6-911P-201ENST00000516523 104 ntBASIC2.96□□□□□ -1.94
PF4V1P10720 RPPH1-2P-201ENST00000516688 293 ntBASIC2.96□□□□□ -1.94
PF4V1P10720 RN7SKP295-201ENST00000517264 153 ntBASIC2.96□□□□□ -1.94
PF4V1P10720 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.96□□□□□ -1.94
PF4V1P10720 AC092447.9-201ENST00000603395 144 ntBASIC2.96□□□□□ -1.94
PF4V1P10720 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PF4V1P10720 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PF4V1P10720 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PF4V1P10720 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PF4V1P10720 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PF4V1P10720 ZNF204P-201ENST00000416749 2397 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.95□□□□□ -1.94
PF4V1P10720 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.95□□□□□ -1.94
PF4V1P10720 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
PF4V1P10720 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PF4V1P10720 Y_RNA.28-201ENST00000362554 111 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 RNA5SP72-201ENST00000364442 117 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 DYNLT3P1-201ENST00000378574 347 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 RNU6-26P-201ENST00000383985 107 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 RNY1P14-201ENST00000384426 108 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 MIR218-2-201ENST00000385006 110 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 Y_RNA.592-201ENST00000410274 109 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 RNU2-32P-201ENST00000411193 191 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 AC114482.1-201ENST00000418010 247 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 PMCHL1-202ENST00000423102 261 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 TRBV12-2-201ENST00000489763 344 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 RNA5SP208-201ENST00000516156 78 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 Y_RNA.711-201ENST00000516993 102 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 RNU6-988P-201ENST00000519081 107 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 AC022616.8-201ENST00000533569 253 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.95□□□□□ -1.94
PF4V1P10720 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
PF4V1P10720 AC090877.1-201ENST00000561418 344 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.95□□□□□ -1.94
PF4V1P10720 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.95□□□□□ -1.94
PF4V1P10720 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.95□□□□□ -1.94
PF4V1P10720 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.95□□□□□ -1.94
PF4V1P10720 MIR3171-201ENST00000584270 74 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 AL137849.1-201ENST00000604767 169 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
PF4V1P10720 AC018692.3-201ENST00000623929 123 ntBASIC2.95□□□□□ -1.94
PF4V1P10720 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.95□□□□□ -1.94
PF4V1P10720 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.95□□□□□ -1.94
PF4V1P10720 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PF4V1P10720 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.94□□□□□ -1.94
PF4V1P10720 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.94□□□□□ -1.94
PF4V1P10720 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PF4V1P10720 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PF4V1P10720 RNU6-222P-201ENST00000362438 107 ntBASIC2.94□□□□□ -1.94
PF4V1P10720 Y_RNA.31-201ENST00000362574 102 ntBASIC2.94□□□□□ -1.94
PF4V1P10720 RNA5SP119-201ENST00000362715 117 ntBASIC2.94□□□□□ -1.94
PF4V1P10720 RNU1-23P-201ENST00000363361 144 ntBASIC2.94□□□□□ -1.94
PF4V1P10720 Y_RNA.358-201ENST00000365491 99 ntBASIC2.94□□□□□ -1.94
PF4V1P10720 MIR10B-201ENST00000385011 110 ntBASIC2.94□□□□□ -1.94
PF4V1P10720 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PF4V1P10720 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PF4V1P10720 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.94□□□□□ -1.94
PF4V1P10720 MCFD2P1-201ENST00000417812 300 ntBASIC2.94□□□□□ -1.94
PF4V1P10720 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.94□□□□□ -1.94
PF4V1P10720 AC096638.1-201ENST00000444678 216 ntBASIC2.94□□□□□ -1.94
PF4V1P10720 GSTA11P-201ENST00000452866 669 ntBASIC2.94□□□□□ -1.94
PF4V1P10720 AL133162.1-201ENST00000463228 453 ntBASIC2.94□□□□□ -1.94
PF4V1P10720 RAC1P2-201ENST00000511164 579 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms