Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 UBL5P1-201ENST00000507979 193 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 AC117522.1-201ENST00000509821 380 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC172P0C7W6 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC172P0C7W6 CENPUP1-201ENST00000526649 1202 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.08□□□□□ -2.24
CCDC172P0C7W6 AL512310.8-201ENST00000550183 120 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC172P0C7W6 AC008752.3-201ENST00000588113 712 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 AC099654.5-201ENST00000636479 350 ntBASIC1.08□□□□□ -2.24
CCDC172P0C7W6 SNORA32.2-201ENST00000384049 122 ntBASIC1.07□□□□□ -2.24
CCDC172P0C7W6 RNU2-3P-201ENST00000410144 191 ntBASIC1.07□□□□□ -2.24
CCDC172P0C7W6 RPS27AP14-201ENST00000422868 454 ntBASIC1.07□□□□□ -2.24
CCDC172P0C7W6 SNX2P2-201ENST00000424553 323 ntBASIC1.07□□□□□ -2.24
CCDC172P0C7W6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.07□□□□□ -2.24
CCDC172P0C7W6 PGBD4P5-201ENST00000445958 426 ntBASIC1.07□□□□□ -2.24
CCDC172P0C7W6 ATP5J2P3-201ENST00000451550 258 ntBASIC1.07□□□□□ -2.24
CCDC172P0C7W6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC172P0C7W6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC172P0C7W6 AC112204.1-201ENST00000502591 103 ntBASIC1.07□□□□□ -2.24
CCDC172P0C7W6 AC010587.1-201ENST00000505809 469 ntBASIC1.07□□□□□ -2.24
CCDC172P0C7W6 MTND4LP18-201ENST00000526864 291 ntBASIC1.07□□□□□ -2.24
CCDC172P0C7W6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.07□□□□□ -2.24
CCDC172P0C7W6 AC073539.2-201ENST00000597113 165 ntBASIC1.07□□□□□ -2.24
CCDC172P0C7W6 MZT1P2-201ENST00000604387 248 ntBASIC1.07□□□□□ -2.24
CCDC172P0C7W6 Z69720.2-201ENST00000624755 279 ntBASIC1.07□□□□□ -2.24
CCDC172P0C7W6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 Y_RNA.140-201ENST00000363474 103 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 SNORA29-201ENST00000384183 140 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 MIR558-201ENST00000384920 94 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 MTCYBP36-201ENST00000404146 440 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 RNU6-607P-201ENST00000411283 108 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 CYCSP33-201ENST00000414485 327 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 ARL5AP1-201ENST00000418991 388 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AC000111.3-201ENST00000433478 193 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AC119618.1-201ENST00000434191 222 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AC132479.1-201ENST00000449160 144 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 TOMM22P6-201ENST00000465035 409 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 MTCO2P29-201ENST00000465212 189 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AL163195.1-201ENST00000496941 348 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AP001893.2-201ENST00000526949 202 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AC136932.1-201ENST00000574771 208 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AC012507.3-201ENST00000603556 477 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 MIR3976-201ENST00000606807 139 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AL451064.1-201ENST00000607718 471 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AL607023.1-201ENST00000620045 248 ntBASIC1.06□□□□□ -2.24
CCDC172P0C7W6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC172P0C7W6 AL391516.1-201ENST00000554380 2449 ntBASIC1.05□□□□□ -2.24
CCDC172P0C7W6 RNU1-22P-201ENST00000363334 158 ntBASIC1.05□□□□□ -2.24
CCDC172P0C7W6 RNU6-61P-201ENST00000365528 109 ntBASIC1.05□□□□□ -2.24
CCDC172P0C7W6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC172P0C7W6 RNU6-43P-201ENST00000384302 107 ntBASIC1.05□□□□□ -2.24
CCDC172P0C7W6 MTCO1P21-201ENST00000416634 589 ntBASIC1.05□□□□□ -2.24
CCDC172P0C7W6 AL590135.1-201ENST00000422215 156 ntBASIC1.05□□□□□ -2.24
CCDC172P0C7W6 AC019205.3-201ENST00000424573 156 ntBASIC1.05□□□□□ -2.24
CCDC172P0C7W6 AC007283.2-201ENST00000424739 197 ntBASIC1.05□□□□□ -2.24
CCDC172P0C7W6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC172P0C7W6 PRPS1P1-201ENST00000445305 876 ntBASIC1.05□□□□□ -2.24
CCDC172P0C7W6 AC016700.2-201ENST00000446011 156 ntBASIC1.05□□□□□ -2.24
CCDC172P0C7W6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC172P0C7W6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC172P0C7W6 RPS23P4-201ENST00000487908 423 ntBASIC1.05□□□□□ -2.24
CCDC172P0C7W6 AC015911.1-201ENST00000495111 156 ntBASIC1.05□□□□□ -2.24
CCDC172P0C7W6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC172P0C7W6 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC172P0C7W6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC172P0C7W6 BNIP3P8-201ENST00000597863 560 ntBASIC1.05□□□□□ -2.24
CCDC172P0C7W6 RNU1-96P-201ENST00000364163 162 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 RNU6-1141P-201ENST00000364520 107 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 SNORD31B-201ENST00000364977 69 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 RNU6-968P-201ENST00000384076 107 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 RNU6-331P-201ENST00000384724 107 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 RNU6-293P-201ENST00000411259 106 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 MED13P1-201ENST00000428342 171 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 AC244670.1-201ENST00000436879 112 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 RPS24P1-201ENST00000438550 371 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 SNRPFP4-201ENST00000456366 242 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 RPL31P3-201ENST00000458430 332 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 snoU109.3-201ENST00000459477 145 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 SNRPGP7-201ENST00000469016 106 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 AC114982.1-201ENST00000469402 321 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 SNORD116-28-201ENST00000516123 91 ntBASIC1.04□□□□□ -2.24
CCDC172P0C7W6 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.04□□□□□ -2.24
CCDC172P0C7W6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.04□□□□□ -2.24
CCDC172P0C7W6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.04□□□□□ -2.24
CCDC172P0C7W6 AC104984.5-201ENST00000586878 94 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms