Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC005776.1-201ENST00000603164 290 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
FREM3P0C091 RMST_4.1-201ENST00000616886 107 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 RNA5SP327-201ENST00000362494 101 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 RNU6-212P-201ENST00000362642 104 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 SNORD3E-201ENST00000362899 217 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 Y_RNA.115-201ENST00000363272 98 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 RNU1-96P-201ENST00000364163 162 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 SMIM11P1-201ENST00000369586 178 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 RNU6-968P-201ENST00000384076 107 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 MIR19B1-201ENST00000384829 87 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 MIR508-201ENST00000384857 115 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 MIR194-1-201ENST00000384892 85 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 RNU6-910P-201ENST00000390844 107 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 ART2BP-201ENST00000453501 499 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 AC119751.4-201ENST00000507498 357 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.52□□□□□ -2.33
FREM3P0C091 RNA5SP503-201ENST00000517047 117 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 MIR3136-201ENST00000583498 78 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.52□□□□□ -2.33
FREM3P0C091 AL136363.2-201ENST00000604173 851 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 MIR3976-201ENST00000606807 139 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 AL158163.2-201ENST00000619110 700 ntBASIC0.52□□□□□ -2.33
FREM3P0C091 Y_RNA.258-201ENST00000364613 105 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 MIR100-201ENST00000385259 80 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 FCF1P10-201ENST00000407590 479 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 PIGFP2-201ENST00000421400 651 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 SNX2P2-201ENST00000424553 323 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 MTCO2P1-201ENST00000424648 477 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.51□□□□□ -2.33
FREM3P0C091 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.51□□□□□ -2.33
FREM3P0C091 AC134050.1-201ENST00000495088 933 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 AC079140.3-201ENST00000511111 550 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 AC109445.1-201ENST00000512356 383 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 SNORA3.4-201ENST00000515969 96 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 SNORD60.2-201ENST00000516883 86 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 AC068587.4-201ENST00000533893 186 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 AC025678.1-201ENST00000567861 338 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 AC091135.1-201ENST00000585943 307 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 AC174048.1-201ENST00000603389 144 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 AL355816.2-201ENST00000610049 647 ntBASIC0.51□□□□□ -2.33
FREM3P0C091 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.51□□□□□ -2.33
FREM3P0C091 OR4G2P-201ENST00000328113 903 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 RNU5E-7P-201ENST00000365290 117 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 RNU6-1065P-201ENST00000384513 106 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.5□□□□□ -2.33
FREM3P0C091 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.5□□□□□ -2.33
FREM3P0C091 SNORA31.4-201ENST00000516049 129 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 Y_RNA.687-201ENST00000516558 91 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.5□□□□□ -2.33
FREM3P0C091 AL360085.1-201ENST00000604713 532 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 AC245297.2-201ENST00000610119 565 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
FREM3P0C091 SNORD56.1-201ENST00000362913 68 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 RNA5SP62-201ENST00000363457 110 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 RNU6-843P-201ENST00000384454 104 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 MIR515-2-201ENST00000384883 83 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 MIR515-1-201ENST00000384884 83 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 RNU1-119P-201ENST00000391122 165 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 VPS26BP1-201ENST00000417155 755 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.5□□□□□ -2.33
FREM3P0C091 LARP1BP3-201ENST00000437229 869 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 AC006026.2-201ENST00000457376 180 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.5□□□□□ -2.33
FREM3P0C091 AC067942.3-201ENST00000512025 362 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 RNU6-567P-201ENST00000516746 107 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 RNU6-165P-201ENST00000517170 99 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 SUMO2P18-201ENST00000518873 252 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 AP003355.1-201ENST00000518956 587 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 AC087894.1-201ENST00000538359 518 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.5□□□□□ -2.33
FREM3P0C091 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 MTND3P13-201ENST00000574391 343 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 AC004808.1-201ENST00000627671 721 ntBASIC0.5□□□□□ -2.33
FREM3P0C091 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
FREM3P0C091 RNU4-56P-201ENST00000364700 142 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 COX6CP10-201ENST00000416832 224 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 ARL5AP1-201ENST00000418991 388 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.49□□□□□ -2.33
FREM3P0C091 MTND4P15-201ENST00000437913 1033 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 MTND1P30-201ENST00000441241 901 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.49□□□□□ -2.33
FREM3P0C091 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.49□□□□□ -2.33
FREM3P0C091 MTCO3P9-201ENST00000506989 781 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 AC026616.1-201ENST00000523157 525 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.49□□□□□ -2.33
FREM3P0C091 AC009712.1-201ENST00000564938 316 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 VN1R82P-201ENST00000601481 356 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 AC091925.1-201ENST00000623204 462 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 AL442644.1-201ENST00000454390 3105 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 Y_RNA.274-201ENST00000364714 101 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
FREM3P0C091 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
FREM3P0C091 RNU6-1054P-201ENST00000411293 104 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.49□□□□□ -2.33
FREM3P0C091 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.49□□□□□ -2.33
FREM3P0C091 RPL23AP30-201ENST00000432419 501 ntBASIC0.49□□□□□ -2.33
FREM3P0C091 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.49□□□□□ -2.33
FREM3P0C091 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms