Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC241585.2-209ENST00000638217 143 ntBASIC2.79□□□□□ -1.96
MMP3P08254 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
MMP3P08254 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.79□□□□□ -1.96
MMP3P08254 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.79□□□□□ -1.96
MMP3P08254 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
MMP3P08254 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
MMP3P08254 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.79□□□□□ -1.96
MMP3P08254 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
MMP3P08254 Y_RNA.2-201ENST00000362330 96 ntBASIC2.78□□□□□ -1.96
MMP3P08254 Y_RNA.132-201ENST00000363421 102 ntBASIC2.78□□□□□ -1.96
MMP3P08254 MIR592-201ENST00000384959 97 ntBASIC2.78□□□□□ -1.96
MMP3P08254 MIR767-201ENST00000390228 109 ntBASIC2.78□□□□□ -1.96
MMP3P08254 RNA5SP210-201ENST00000391034 120 ntBASIC2.78□□□□□ -1.96
MMP3P08254 AL359511.1-201ENST00000402970 211 ntBASIC2.78□□□□□ -1.96
MMP3P08254 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.78□□□□□ -1.96
MMP3P08254 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.78□□□□□ -1.96
MMP3P08254 Y_RNA.653-201ENST00000459091 95 ntBASIC2.78□□□□□ -1.96
MMP3P08254 MIR2053-201ENST00000459295 91 ntBASIC2.78□□□□□ -1.96
MMP3P08254 SNRPGP7-201ENST00000469016 106 ntBASIC2.78□□□□□ -1.96
MMP3P08254 RPS27P26-201ENST00000494583 239 ntBASIC2.78□□□□□ -1.96
MMP3P08254 RN7SL636P-201ENST00000497504 294 ntBASIC2.78□□□□□ -1.96
MMP3P08254 AC234781.5-201ENST00000508429 271 ntBASIC2.78□□□□□ -1.96
MMP3P08254 RAC1P5-201ENST00000512182 576 ntBASIC2.78□□□□□ -1.96
MMP3P08254 SCARNA16.2-201ENST00000516520 172 ntBASIC2.78□□□□□ -1.96
MMP3P08254 Y_RNA.701-201ENST00000516812 110 ntBASIC2.78□□□□□ -1.96
MMP3P08254 SNORA31.18-201ENST00000517043 134 ntBASIC2.78□□□□□ -1.96
MMP3P08254 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.78□□□□□ -1.96
MMP3P08254 AC091152.3-201ENST00000604227 325 ntBASIC2.78□□□□□ -1.96
MMP3P08254 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.78□□□□□ -1.96
MMP3P08254 PISRT1.1-201ENST00000616930 107 ntBASIC2.78□□□□□ -1.96
MMP3P08254 AC008264.2-201ENST00000610193 3731 ntBASIC2.78□□□□□ -1.96
MMP3P08254 AC010889.1-201ENST00000566193 2666 ntBASIC2.77□□□□□ -1.97
MMP3P08254 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.77□□□□□ -1.97
MMP3P08254 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.77□□□□□ -1.97
MMP3P08254 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
MMP3P08254 MIR369-201ENST00000362155 70 ntBASIC2.77□□□□□ -1.97
MMP3P08254 RNU6-799P-201ENST00000363567 107 ntBASIC2.77□□□□□ -1.97
MMP3P08254 SNORD114-30-201ENST00000364448 72 ntBASIC2.77□□□□□ -1.97
MMP3P08254 RNU6-593P-201ENST00000364716 112 ntBASIC2.77□□□□□ -1.97
MMP3P08254 Y_RNA.315-201ENST00000365117 102 ntBASIC2.77□□□□□ -1.97
MMP3P08254 RNU6-890P-201ENST00000384121 107 ntBASIC2.77□□□□□ -1.97
MMP3P08254 RNU6-43P-201ENST00000384302 107 ntBASIC2.77□□□□□ -1.97
MMP3P08254 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
MMP3P08254 RPL21P75-201ENST00000396599 483 ntBASIC2.77□□□□□ -1.97
MMP3P08254 RPL21P28-201ENST00000401418 483 ntBASIC2.77□□□□□ -1.97
MMP3P08254 AL590004.2-201ENST00000404787 371 ntBASIC2.77□□□□□ -1.97
MMP3P08254 RN7SKP192-201ENST00000411291 327 ntBASIC2.77□□□□□ -1.97
MMP3P08254 AL354751.2-201ENST00000415471 210 ntBASIC2.77□□□□□ -1.97
MMP3P08254 Z98742.3-201ENST00000418637 326 ntBASIC2.77□□□□□ -1.97
MMP3P08254 AL365496.1-201ENST00000426885 215 ntBASIC2.77□□□□□ -1.97
MMP3P08254 AC244505.4-201ENST00000434905 287 ntBASIC2.77□□□□□ -1.97
MMP3P08254 SSXP5-201ENST00000443473 287 ntBASIC2.77□□□□□ -1.97
MMP3P08254 SNORD5.1-201ENST00000458800 75 ntBASIC2.77□□□□□ -1.97
MMP3P08254 Y_RNA.638-201ENST00000459374 113 ntBASIC2.77□□□□□ -1.97
MMP3P08254 snoU13.15-201ENST00000459407 104 ntBASIC2.77□□□□□ -1.97
MMP3P08254 RPL21P39-201ENST00000463605 483 ntBASIC2.77□□□□□ -1.97
MMP3P08254 AC008571.1-201ENST00000467232 300 ntBASIC2.77□□□□□ -1.97
MMP3P08254 AC027575.1-201ENST00000481064 460 ntBASIC2.77□□□□□ -1.97
MMP3P08254 AC087190.1-201ENST00000484462 480 ntBASIC2.77□□□□□ -1.97
MMP3P08254 AC093591.1-201ENST00000491435 481 ntBASIC2.77□□□□□ -1.97
MMP3P08254 RPL21P16-201ENST00000495531 483 ntBASIC2.77□□□□□ -1.97
MMP3P08254 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.77□□□□□ -1.97
MMP3P08254 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.77□□□□□ -1.97
MMP3P08254 AC093303.1-201ENST00000514549 295 ntBASIC2.77□□□□□ -1.97
MMP3P08254 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.77□□□□□ -1.97
MMP3P08254 CKS1BP7-201ENST00000522230 235 ntBASIC2.77□□□□□ -1.97
MMP3P08254 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.77□□□□□ -1.97
MMP3P08254 AC093249.1-201ENST00000567049 203 ntBASIC2.77□□□□□ -1.97
MMP3P08254 AC009163.5-201ENST00000575421 637 ntBASIC2.77□□□□□ -1.97
MMP3P08254 CPDP1-201ENST00000579660 283 ntBASIC2.77□□□□□ -1.97
MMP3P08254 MIR4769-201ENST00000584126 77 ntBASIC2.77□□□□□ -1.97
MMP3P08254 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
MMP3P08254 AC010620.2-201ENST00000600135 313 ntBASIC2.77□□□□□ -1.97
MMP3P08254 AL355877.2-201ENST00000603670 358 ntBASIC2.77□□□□□ -1.97
MMP3P08254 AC108206.1-201ENST00000570186 4159 ntBASIC2.77□□□□□ -1.97
MMP3P08254 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MMP3P08254 SNORA51.4-201ENST00000364993 124 ntBASIC2.76□□□□□ -1.97
MMP3P08254 RPS29P13-201ENST00000402041 169 ntBASIC2.76□□□□□ -1.97
MMP3P08254 RNA5SP344-201ENST00000411081 104 ntBASIC2.76□□□□□ -1.97
MMP3P08254 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.76□□□□□ -1.97
MMP3P08254 AL513477.1-202ENST00000417061 214 ntBASIC2.76□□□□□ -1.97
MMP3P08254 PTGES3P4-201ENST00000426243 356 ntBASIC2.76□□□□□ -1.97
MMP3P08254 MTCO2P12-201ENST00000427426 682 ntBASIC2.76□□□□□ -1.97
MMP3P08254 AL591043.1-201ENST00000432461 424 ntBASIC2.76□□□□□ -1.97
MMP3P08254 RPS29P21-201ENST00000496272 170 ntBASIC2.76□□□□□ -1.97
MMP3P08254 AC091874.1-201ENST00000511402 339 ntBASIC2.76□□□□□ -1.97
MMP3P08254 SNORA31.23-201ENST00000517219 133 ntBASIC2.76□□□□□ -1.97
MMP3P08254 AP005902.1-201ENST00000521358 186 ntBASIC2.76□□□□□ -1.97
MMP3P08254 AC010186.2-204ENST00000537668 439 ntBASIC2.76□□□□□ -1.97
MMP3P08254 MTCO3P13-201ENST00000577757 781 ntBASIC2.76□□□□□ -1.97
MMP3P08254 MIR5690-201ENST00000583739 73 ntBASIC2.76□□□□□ -1.97
MMP3P08254 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.76□□□□□ -1.97
MMP3P08254 AC098657.3-201ENST00000620434 263 ntBASIC2.76□□□□□ -1.97
MMP3P08254 AC110079.1-202ENST00000635213 138 ntBASIC2.76□□□□□ -1.97
MMP3P08254 RBBP8P1-201ENST00000449447 1844 ntBASIC2.76□□□□□ -1.97
MMP3P08254 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MMP3P08254 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
MMP3P08254 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.75□□□□□ -1.97
MMP3P08254 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.75□□□□□ -1.97
MMP3P08254 RNU6-19P-201ENST00000384718 107 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms