Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
VTNP04004 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.33□□□□□ -2.04
VTNP04004 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.33□□□□□ -2.04
VTNP04004 RNU7-66P-201ENST00000459469 62 ntBASIC2.33□□□□□ -2.04
VTNP04004 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.33□□□□□ -2.04
VTNP04004 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.33□□□□□ -2.04
VTNP04004 RNU7-30P-201ENST00000516835 62 ntBASIC2.33□□□□□ -2.04
VTNP04004 SNORA20.3-201ENST00000516880 132 ntBASIC2.33□□□□□ -2.04
VTNP04004 AC109479.2-201ENST00000517842 174 ntBASIC2.33□□□□□ -2.04
VTNP04004 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.33□□□□□ -2.04
VTNP04004 AC087241.2-201ENST00000535801 324 ntBASIC2.33□□□□□ -2.04
VTNP04004 SCOCP1-201ENST00000554676 349 ntBASIC2.33□□□□□ -2.04
VTNP04004 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.33□□□□□ -2.04
VTNP04004 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.33□□□□□ -2.04
VTNP04004 MIR3529-201ENST00000637713 78 ntBASIC2.33□□□□□ -2.04
VTNP04004 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
VTNP04004 MTND4P27-201ENST00000450813 1354 ntBASIC2.33□□□□□ -2.04
VTNP04004 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.32□□□□□ -2.04
VTNP04004 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VTNP04004 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.32□□□□□ -2.04
VTNP04004 RNU6-845P-201ENST00000362578 103 ntBASIC2.32□□□□□ -2.04
VTNP04004 Y_RNA.279-201ENST00000364763 95 ntBASIC2.32□□□□□ -2.04
VTNP04004 RNU6-1329P-201ENST00000365664 107 ntBASIC2.32□□□□□ -2.04
VTNP04004 RNY3P14-201ENST00000384309 102 ntBASIC2.32□□□□□ -2.04
VTNP04004 RNU6-748P-201ENST00000384648 107 ntBASIC2.32□□□□□ -2.04
VTNP04004 MIR764-201ENST00000390811 85 ntBASIC2.32□□□□□ -2.04
VTNP04004 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VTNP04004 RNU6-1140P-201ENST00000410517 106 ntBASIC2.32□□□□□ -2.04
VTNP04004 RNU6-1245P-201ENST00000411130 106 ntBASIC2.32□□□□□ -2.04
VTNP04004 MTND3P8-201ENST00000412909 339 ntBASIC2.32□□□□□ -2.04
VTNP04004 AL590632.1-201ENST00000424289 371 ntBASIC2.32□□□□□ -2.04
VTNP04004 FABP5P14-201ENST00000437273 393 ntBASIC2.32□□□□□ -2.04
VTNP04004 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VTNP04004 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.32□□□□□ -2.04
VTNP04004 AMD1P1-201ENST00000457220 922 ntBASIC2.32□□□□□ -2.04
VTNP04004 RNU6-329P-201ENST00000459618 107 ntBASIC2.32□□□□□ -2.04
VTNP04004 AC090096.1-201ENST00000489168 390 ntBASIC2.32□□□□□ -2.04
VTNP04004 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.32□□□□□ -2.04
VTNP04004 MTCYBP40-201ENST00000509390 1135 ntBASIC2.32□□□□□ -2.04
VTNP04004 RPL39P5-202ENST00000512505 151 ntBASIC2.32□□□□□ -2.04
VTNP04004 RNU6-864P-201ENST00000516256 108 ntBASIC2.32□□□□□ -2.04
VTNP04004 Y_RNA.682-201ENST00000516457 100 ntBASIC2.32□□□□□ -2.04
VTNP04004 RNU6-1088P-201ENST00000516850 104 ntBASIC2.32□□□□□ -2.04
VTNP04004 RNA5SP402-201ENST00000517148 110 ntBASIC2.32□□□□□ -2.04
VTNP04004 HSPE1P18-201ENST00000517602 280 ntBASIC2.32□□□□□ -2.04
VTNP04004 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.32□□□□□ -2.04
VTNP04004 AC118273.2-201ENST00000532092 465 ntBASIC2.32□□□□□ -2.04
VTNP04004 CR383656.8-201ENST00000549046 145 ntBASIC2.32□□□□□ -2.04
VTNP04004 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.32□□□□□ -2.04
VTNP04004 MIR4742-201ENST00000581069 85 ntBASIC2.32□□□□□ -2.04
VTNP04004 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.32□□□□□ -2.04
VTNP04004 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.32□□□□□ -2.04
VTNP04004 AC244517.12-201ENST00000623581 663 ntBASIC2.32□□□□□ -2.04
VTNP04004 MIR7157-201ENST00000635801 60 ntBASIC2.32□□□□□ -2.04
VTNP04004 AC241585.2-209ENST00000638217 143 ntBASIC2.32□□□□□ -2.04
VTNP04004 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VTNP04004 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.32□□□□□ -2.04
VTNP04004 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VTNP04004 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
VTNP04004 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
VTNP04004 RNU6-562P-201ENST00000362731 107 ntBASIC2.31□□□□□ -2.04
VTNP04004 Y_RNA.88-201ENST00000363029 99 ntBASIC2.31□□□□□ -2.04
VTNP04004 RNU6-336P-201ENST00000364891 107 ntBASIC2.31□□□□□ -2.04
VTNP04004 RNU2-2P-201ENST00000410396 191 ntBASIC2.31□□□□□ -2.04
VTNP04004 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.31□□□□□ -2.04
VTNP04004 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.31□□□□□ -2.04
VTNP04004 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.31□□□□□ -2.04
VTNP04004 AL445646.1-201ENST00000431784 216 ntBASIC2.31□□□□□ -2.04
VTNP04004 CR769767.1-201ENST00000436337 346 ntBASIC2.31□□□□□ -2.04
VTNP04004 RNU6-1037P-201ENST00000459571 107 ntBASIC2.31□□□□□ -2.04
VTNP04004 AC112771.1-201ENST00000463581 102 ntBASIC2.31□□□□□ -2.04
VTNP04004 RPL30P12-201ENST00000474666 353 ntBASIC2.31□□□□□ -2.04
VTNP04004 RPL36AP48-201ENST00000485521 314 ntBASIC2.31□□□□□ -2.04
VTNP04004 AC018437.1-201ENST00000492214 406 ntBASIC2.31□□□□□ -2.04
VTNP04004 HMGN1P12-201ENST00000499125 195 ntBASIC2.31□□□□□ -2.04
VTNP04004 AC023141.11-201ENST00000508864 202 ntBASIC2.31□□□□□ -2.04
VTNP04004 AC096745.1-201ENST00000509945 370 ntBASIC2.31□□□□□ -2.04
VTNP04004 AC107222.1-201ENST00000510899 637 ntBASIC2.31□□□□□ -2.04
VTNP04004 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.31□□□□□ -2.04
VTNP04004 MIR3199-1-201ENST00000582434 88 ntBASIC2.31□□□□□ -2.04
VTNP04004 MIR4765-201ENST00000585007 77 ntBASIC2.31□□□□□ -2.04
VTNP04004 AC021646.1-201ENST00000605469 484 ntBASIC2.31□□□□□ -2.04
VTNP04004 U2.15-201ENST00000611544 191 ntBASIC2.31□□□□□ -2.04
VTNP04004 U2.16-201ENST00000613119 191 ntBASIC2.31□□□□□ -2.04
VTNP04004 U2.12-201ENST00000613778 191 ntBASIC2.31□□□□□ -2.04
VTNP04004 U2.20-201ENST00000613956 192 ntBASIC2.31□□□□□ -2.04
VTNP04004 AL138726.1-201ENST00000614873 333 ntBASIC2.31□□□□□ -2.04
VTNP04004 U2.9-201ENST00000615427 191 ntBASIC2.31□□□□□ -2.04
VTNP04004 uc_338.15-201ENST00000615470 191 ntBASIC2.31□□□□□ -2.04
VTNP04004 U2.11-201ENST00000616345 191 ntBASIC2.31□□□□□ -2.04
VTNP04004 U2.2-201ENST00000616535 191 ntBASIC2.31□□□□□ -2.04
VTNP04004 U2.3-201ENST00000617785 191 ntBASIC2.31□□□□□ -2.04
VTNP04004 U2.19-201ENST00000618602 191 ntBASIC2.31□□□□□ -2.04
VTNP04004 RNU2-1-201ENST00000618664 191 ntBASIC2.31□□□□□ -2.04
VTNP04004 U2.6-201ENST00000619225 191 ntBASIC2.31□□□□□ -2.04
VTNP04004 U2.5-201ENST00000619465 191 ntBASIC2.31□□□□□ -2.04
VTNP04004 U2.10-201ENST00000620268 191 ntBASIC2.31□□□□□ -2.04
VTNP04004 AC138627.2-201ENST00000624202 601 ntBASIC2.31□□□□□ -2.04
VTNP04004 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.31□□□□□ -2.04
VTNP04004 AL133216.2-202ENST00000634512 349 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms