Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL138889.2-201ENST00000603883 242 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AL138963.2-201ENST00000605137 226 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AL139286.2-201ENST00000606838 396 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.97□□□□□ -2.25
COL4A1P02462 AL773524.1-201ENST00000614065 229 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AC131159.1-201ENST00000621854 213 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 AC138627.2-201ENST00000624202 601 ntBASIC0.97□□□□□ -2.25
COL4A1P02462 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
COL4A1P02462 Y_RNA.85-201ENST00000363014 111 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 SNORD114-2-201ENST00000363953 78 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 RNU6-169P-201ENST00000365336 107 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 RNU6-395P-201ENST00000365662 106 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 RNU6-39P-201ENST00000384344 107 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 SNORA24.1-201ENST00000384401 135 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 RNU6-1179P-201ENST00000384667 107 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 Y_RNA.576-201ENST00000384781 102 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 SNORA40.3-201ENST00000390964 122 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 MIR1302-8-201ENST00000408342 128 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.96□□□□□ -2.26
COL4A1P02462 BX295541.1-201ENST00000417774 250 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.96□□□□□ -2.26
COL4A1P02462 CYCSP46-201ENST00000423569 204 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.96□□□□□ -2.26
COL4A1P02462 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.96□□□□□ -2.26
COL4A1P02462 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.96□□□□□ -2.26
COL4A1P02462 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.96□□□□□ -2.26
COL4A1P02462 MTND1P12-201ENST00000455231 147 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 AP001324.2-201ENST00000461163 319 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.96□□□□□ -2.26
COL4A1P02462 AP001025.1-201ENST00000486139 332 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 RNA5SP121-201ENST00000516537 101 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 SNORA48.11-201ENST00000517015 89 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.96□□□□□ -2.26
COL4A1P02462 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.96□□□□□ -2.26
COL4A1P02462 MIR4760-201ENST00000585040 80 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 uc_338.15-201ENST00000615470 191 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 AC009159.2-201ENST00000617603 606 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 AL159153.1-201ENST00000619688 317 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 AC019226.2-201ENST00000625973 424 ntBASIC0.96□□□□□ -2.26
COL4A1P02462 MIR126-201ENST00000362291 85 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 RNU5E-1-201ENST00000362477 120 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 Y_RNA.33-201ENST00000362591 102 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 RNU5F-6P-201ENST00000362979 116 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 RNY4P34-201ENST00000364779 95 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 Y_RNA.294-201ENST00000364916 102 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 SNORA20.2-201ENST00000383922 131 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 SNORA75B-201ENST00000384053 137 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 RNU6-17P-201ENST00000384245 107 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 RNU6-18P-201ENST00000384527 107 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 RNU6-817P-201ENST00000391083 104 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 RNA5SP450-201ENST00000411206 102 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 RNU6-195P-201ENST00000411352 109 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 RPS3AP3-201ENST00000411933 242 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.95□□□□□ -2.26
COL4A1P02462 AC092809.3-201ENST00000415453 231 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.95□□□□□ -2.26
COL4A1P02462 AC132479.1-201ENST00000449160 144 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 snoU109.1-201ENST00000459339 135 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.95□□□□□ -2.26
COL4A1P02462 MTCO3P9-201ENST00000506989 781 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 AC104806.1-201ENST00000508720 308 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.95□□□□□ -2.26
COL4A1P02462 AC104136.1-201ENST00000512969 394 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 SMURF2P1-201ENST00000514992 481 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 Vault.3-201ENST00000516676 95 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 MIR3126-201ENST00000577443 74 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.95□□□□□ -2.26
COL4A1P02462 AL355598.1-201ENST00000604169 202 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 AL022161.1-201ENST00000604390 213 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 ELOCP5-201ENST00000604924 333 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 Z84480.1-201ENST00000605131 311 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 PRR13P7-201ENST00000605538 430 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 AL589743.1-201ENST00000551932 2712 ntBASIC0.95□□□□□ -2.26
COL4A1P02462 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COL4A1P02462 RNU6-181P-201ENST00000363225 107 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 SNORD114-23-201ENST00000363536 72 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 RNU6-116P-201ENST00000384042 109 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 MT-TH-201ENST00000387441 69 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
COL4A1P02462 RNU6-293P-201ENST00000411259 106 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COL4A1P02462 AC008267.5-201ENST00000424928 265 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A1P02462 CBX3P6-201ENST00000430257 527 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.94□□□□□ -2.26
COL4A1P02462 MTATP6P16-201ENST00000434543 526 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC009961.2-201ENST00000435771 251 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 JTBP1-201ENST00000441314 247 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A1P02462 USP9YP12-201ENST00000450481 570 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC003071.1-201ENST00000451219 789 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 ZNF114P1-201ENST00000453500 292 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 BET1P1-201ENST00000482276 359 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.94□□□□□ -2.26
COL4A1P02462 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A1P02462 MTCO3P7-201ENST00000510008 774 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 AC105417.1-201ENST00000514691 285 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 RNU6-970P-201ENST00000516312 107 ntBASIC0.94□□□□□ -2.26
COL4A1P02462 RNU6-445P-201ENST00000516949 107 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms