Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 RNU6-546P-201ENST00000383991 107 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 MIR514A2-201ENST00000385131 88 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 MIR514A3-201ENST00000385132 88 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 RNU2-48P-201ENST00000410694 191 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 RNU2-32P-201ENST00000411193 191 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 AL139156.1-201ENST00000412785 841 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 MTCO3P41-201ENST00000414801 328 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.33□□□□□ -2.04
GGPS1O95749 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.33□□□□□ -2.04
GGPS1O95749 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.33□□□□□ -2.04
GGPS1O95749 MTCO2P7-201ENST00000446518 666 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 Y_RNA.654-201ENST00000497848 106 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 RNU6-237P-201ENST00000515985 71 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 RNU6-1038P-201ENST00000516516 104 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 RNU6-667P-201ENST00000517186 102 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.33□□□□□ -2.04
GGPS1O95749 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.33□□□□□ -2.04
GGPS1O95749 DEFB122-202ENST00000569013 197 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.33□□□□□ -2.04
GGPS1O95749 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.33□□□□□ -2.04
GGPS1O95749 AC092747.3-201ENST00000603769 301 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 AL356157.2-201ENST00000605122 111 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 AC018889.1-201ENST00000605372 397 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 AC092954.2-201ENST00000609103 430 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 Y_RNA.783-201ENST00000613546 102 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 YWHAEP7-203ENST00000622054 312 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 AC080100.1-201ENST00000624239 5356 ntBASIC2.33□□□□□ -2.04
GGPS1O95749 RNU6-623P-201ENST00000363143 105 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 SNORD32A-201ENST00000364805 84 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 Y_RNA.378-201ENST00000365652 113 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 HMGB3P2-201ENST00000411913 584 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.32□□□□□ -2.04
GGPS1O95749 ARL5AP1-201ENST00000418991 388 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.32□□□□□ -2.04
GGPS1O95749 WARS2P1-201ENST00000429678 537 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.32□□□□□ -2.04
GGPS1O95749 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.32□□□□□ -2.04
GGPS1O95749 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.32□□□□□ -2.04
GGPS1O95749 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.32□□□□□ -2.04
GGPS1O95749 AC090255.1-201ENST00000495779 349 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 HMGB1P35-201ENST00000503360 598 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 AC116337.1-201ENST00000509680 687 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 RNU6-1069P-201ENST00000516612 133 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.32□□□□□ -2.04
GGPS1O95749 AC022616.8-201ENST00000533569 253 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 AC245505.1-201ENST00000556398 224 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 AC015712.3-201ENST00000559380 164 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 HMGB1P33-201ENST00000563485 527 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 MIR3136-201ENST00000583498 78 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 AL034555.1-201ENST00000604816 211 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 AC025754.2-201ENST00000606491 432 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
GGPS1O95749 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
GGPS1O95749 AC022202.1-201ENST00000613515 211 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 AC015540.1-201ENST00000615828 501 ntBASIC2.32□□□□□ -2.04
GGPS1O95749 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.32□□□□□ -2.04
GGPS1O95749 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
GGPS1O95749 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
GGPS1O95749 Y_RNA.41-201ENST00000362646 102 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 SNORA6-201ENST00000384033 151 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
GGPS1O95749 RNU6-780P-201ENST00000391030 104 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 RN7SKP61-201ENST00000410642 295 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 SEPT14P3-201ENST00000439401 183 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 MTCO2P3-201ENST00000442543 421 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 AL732372.2-207ENST00000445840 183 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.31□□□□□ -2.04
GGPS1O95749 MTND3P16-201ENST00000452205 344 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 SEPT14P2-201ENST00000453405 183 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.31□□□□□ -2.04
GGPS1O95749 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.31□□□□□ -2.04
GGPS1O95749 RNU6-1208P-201ENST00000459588 107 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 AC108210.2-201ENST00000503681 201 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 SEPT14P4-201ENST00000513445 186 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 AC107953.1-201ENST00000522216 297 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 FO082796.1-201ENST00000523795 183 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.31□□□□□ -2.04
GGPS1O95749 AL031274.2-201ENST00000599419 203 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 SNRPGP17-201ENST00000603780 214 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 AC092807.2-201ENST00000609367 243 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 AL132822.1-201ENST00000617063 513 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 SNORD98-201ENST00000636377 67 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 AC068137.3-201ENST00000639191 341 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 AC099654.12-201ENST00000639868 649 ntBASIC2.31□□□□□ -2.04
GGPS1O95749 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
GGPS1O95749 RNU6-611P-201ENST00000384276 104 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 SNORD73A-201ENST00000386062 65 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 AL355497.1-201ENST00000406262 551 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 Y_RNA.597-201ENST00000410463 100 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
GGPS1O95749 AL590556.1-201ENST00000423231 483 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 RPL23AP95-201ENST00000426806 265 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 MTND3P21-201ENST00000433774 331 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 AC244670.1-201ENST00000436879 112 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 IPO7P1-201ENST00000442031 636 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.3□□□□□ -2.04
GGPS1O95749 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.3□□□□□ -2.04
GGPS1O95749 SNRPGP7-201ENST00000469016 106 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms