Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.44□□□□□ -1.86
CNOT4O95628 MIR3133-201ENST00000583157 78 ntBASIC3.44□□□□□ -1.86
CNOT4O95628 IPO8P1-201ENST00000455509 3109 ntBASIC3.44□□□□□ -1.86
CNOT4O95628 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CNOT4O95628 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CNOT4O95628 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.43□□□□□ -1.86
CNOT4O95628 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CNOT4O95628 Z98749.2-208ENST00000381646 500 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 RNU6-187P-201ENST00000384139 106 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 RNU6-658P-201ENST00000384606 106 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CNOT4O95628 RN7SKP156-201ENST00000410308 342 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 AC091179.1-201ENST00000461606 579 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 AC087477.1-201ENST00000465747 340 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 AP000870.1-201ENST00000472927 406 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 AF186996.7-201ENST00000492781 209 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.43□□□□□ -1.86
CNOT4O95628 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.43□□□□□ -1.86
CNOT4O95628 RNU6-1231P-201ENST00000517185 103 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.43□□□□□ -1.86
CNOT4O95628 AL360157.1-201ENST00000565962 87 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 Z83818.1-201ENST00000603584 150 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 AC007179.3-201ENST00000604976 235 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 AC037487.3-201ENST00000606668 112 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 SNORD113-5-201ENST00000607261 78 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.43□□□□□ -1.86
CNOT4O95628 AL591424.2-201ENST00000617023 128 ntBASIC3.43□□□□□ -1.86
CNOT4O95628 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.43□□□□□ -1.86
CNOT4O95628 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CNOT4O95628 HAUS6P2-201ENST00000433254 2404 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.42□□□□□ -1.86
CNOT4O95628 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CNOT4O95628 RNU6-326P-201ENST00000365480 107 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 RNU1-89P-201ENST00000384592 164 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 MIR30B-201ENST00000384850 88 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 MIR518D-201ENST00000385014 87 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CNOT4O95628 MTCO2P33-201ENST00000402100 465 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 RNU6-1245P-201ENST00000411130 106 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 AC243964.1-201ENST00000441814 261 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 AL031659.1-201ENST00000447075 539 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.42□□□□□ -1.86
CNOT4O95628 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.42□□□□□ -1.86
CNOT4O95628 RPS27P26-201ENST00000494583 239 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 RN7SL323P-201ENST00000494712 295 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 RPL31P61-201ENST00000496160 376 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 RNU2-31P-201ENST00000516954 155 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.42□□□□□ -1.86
CNOT4O95628 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.42□□□□□ -1.86
CNOT4O95628 LINC00933-203ENST00000559812 219 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 H3F3AP1-201ENST00000559984 334 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.42□□□□□ -1.86
CNOT4O95628 AC010620.2-201ENST00000600135 313 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 AC009093.8-201ENST00000641769 292 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
CNOT4O95628 AL353743.1-202ENST00000431724 1695 ntBASIC3.42□□□□□ -1.86
CNOT4O95628 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CNOT4O95628 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CNOT4O95628 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CNOT4O95628 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.41□□□□□ -1.86
CNOT4O95628 RNA5SP361-201ENST00000362686 118 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 RNU6-942P-201ENST00000363002 107 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 RNU6-898P-201ENST00000365627 104 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 RNA5SP213-201ENST00000391031 106 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 SNORD12B-201ENST00000410433 91 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 Y_RNA.626-201ENST00000411288 95 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.41□□□□□ -1.86
CNOT4O95628 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.41□□□□□ -1.86
CNOT4O95628 MTATP6P7-201ENST00000453315 681 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 COX6CP14-201ENST00000469580 174 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 RN7SL601P-201ENST00000471221 293 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 AC110768.1-201ENST00000509222 400 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 AC091874.1-201ENST00000511402 339 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 AC026403.1-201ENST00000518938 295 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 AC087441.2-201ENST00000529141 262 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.41□□□□□ -1.86
CNOT4O95628 AL162424.1-201ENST00000602325 221 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 MIR486-1-201ENST00000612171 68 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 AL034408.1-202ENST00000636088 415 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 MIR3199-2-201ENST00000636243 86 ntBASIC3.41□□□□□ -1.86
CNOT4O95628 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.41□□□□□ -1.86
CNOT4O95628 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.41□□□□□ -1.86
CNOT4O95628 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CNOT4O95628 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
CNOT4O95628 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CNOT4O95628 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CNOT4O95628 RNU6-682P-201ENST00000363843 106 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 Y_RNA.286-201ENST00000364813 102 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 SNORD21-201ENST00000383953 95 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 SNORA9-201ENST00000384215 133 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 RNU6-541P-201ENST00000384709 110 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 MIR491-201ENST00000384877 84 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 MIR1289-1-201ENST00000408836 144 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 RNU4-30P-201ENST00000410245 143 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 RNU5A-5P-201ENST00000411054 116 ntBASIC3.4□□□□□ -1.87
CNOT4O95628 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms