Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC104806.1-201ENST00000508720 308 ntBASIC1.11□□□□□ -2.23
VAPBO95292 AC079140.3-201ENST00000511111 550 ntBASIC1.11□□□□□ -2.23
VAPBO95292 AC074344.1-201ENST00000512823 224 ntBASIC1.11□□□□□ -2.23
VAPBO95292 RNU6-685P-201ENST00000517088 95 ntBASIC1.11□□□□□ -2.23
VAPBO95292 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.11□□□□□ -2.23
VAPBO95292 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.11□□□□□ -2.23
VAPBO95292 AP003181.2-201ENST00000528941 181 ntBASIC1.11□□□□□ -2.23
VAPBO95292 AC012414.6-201ENST00000568241 401 ntBASIC1.11□□□□□ -2.23
VAPBO95292 AC083806.3-201ENST00000614016 455 ntBASIC1.11□□□□□ -2.23
VAPBO95292 Z69720.2-201ENST00000624755 279 ntBASIC1.11□□□□□ -2.23
VAPBO95292 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.11□□□□□ -2.23
VAPBO95292 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
VAPBO95292 AC010615.1-201ENST00000594254 1764 ntBASIC1.11□□□□□ -2.23
VAPBO95292 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.1□□□□□ -2.23
VAPBO95292 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
VAPBO95292 SNORA32.2-201ENST00000384049 122 ntBASIC1.1□□□□□ -2.23
VAPBO95292 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
VAPBO95292 RNU2-8P-201ENST00000410727 190 ntBASIC1.1□□□□□ -2.23
VAPBO95292 C8orf59P1-201ENST00000429930 303 ntBASIC1.1□□□□□ -2.23
VAPBO95292 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.1□□□□□ -2.23
VAPBO95292 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.1□□□□□ -2.23
VAPBO95292 RNU6-237P-201ENST00000515985 71 ntBASIC1.1□□□□□ -2.23
VAPBO95292 RNU7-40P-201ENST00000516397 64 ntBASIC1.1□□□□□ -2.23
VAPBO95292 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.1□□□□□ -2.23
VAPBO95292 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.1□□□□□ -2.23
VAPBO95292 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.1□□□□□ -2.23
VAPBO95292 RAB11AP2-201ENST00000545905 639 ntBASIC1.1□□□□□ -2.23
VAPBO95292 AC090115.3-201ENST00000553218 849 ntBASIC1.1□□□□□ -2.23
VAPBO95292 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
VAPBO95292 MIR4999-201ENST00000585029 91 ntBASIC1.1□□□□□ -2.23
VAPBO95292 AC073539.2-201ENST00000597113 165 ntBASIC1.1□□□□□ -2.23
VAPBO95292 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.1□□□□□ -2.23
VAPBO95292 AP000720.1-201ENST00000625091 483 ntBASIC1.1□□□□□ -2.23
VAPBO95292 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
VAPBO95292 RNU5F-6P-201ENST00000362979 116 ntBASIC1.09□□□□□ -2.23
VAPBO95292 RNU5F-7P-201ENST00000363696 115 ntBASIC1.09□□□□□ -2.23
VAPBO95292 RNU6-1141P-201ENST00000364520 107 ntBASIC1.09□□□□□ -2.23
VAPBO95292 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
VAPBO95292 RNU6-293P-201ENST00000411259 106 ntBASIC1.09□□□□□ -2.23
VAPBO95292 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
VAPBO95292 AC000111.3-201ENST00000433478 193 ntBASIC1.09□□□□□ -2.23
VAPBO95292 AC244670.1-201ENST00000436879 112 ntBASIC1.09□□□□□ -2.23
VAPBO95292 AC243964.1-201ENST00000441814 261 ntBASIC1.09□□□□□ -2.23
VAPBO95292 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
VAPBO95292 ATP5J2P3-201ENST00000451550 258 ntBASIC1.09□□□□□ -2.23
VAPBO95292 AL163195.1-201ENST00000496941 348 ntBASIC1.09□□□□□ -2.23
VAPBO95292 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.09□□□□□ -2.23
VAPBO95292 MIR3923-201ENST00000579521 83 ntBASIC1.09□□□□□ -2.23
VAPBO95292 AP005136.1-201ENST00000579765 429 ntBASIC1.09□□□□□ -2.23
VAPBO95292 AC008752.3-201ENST00000588113 712 ntBASIC1.09□□□□□ -2.23
VAPBO95292 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.23
VAPBO95292 AL159152.1-201ENST00000635019 2587 ntBASIC1.09□□□□□ -2.24
VAPBO95292 MTND5P35-201ENST00000557537 1720 ntBASIC1.09□□□□□ -2.24
VAPBO95292 MTND4P14-201ENST00000435799 1354 ntBASIC1.08□□□□□ -2.24
VAPBO95292 AL391994.1-201ENST00000254724 282 ntBASIC1.08□□□□□ -2.24
VAPBO95292 AL391987.6-201ENST00000305671 199 ntBASIC1.08□□□□□ -2.24
VAPBO95292 RNU6-116P-201ENST00000384042 109 ntBASIC1.08□□□□□ -2.24
VAPBO95292 MIR513A1-201ENST00000385138 129 ntBASIC1.08□□□□□ -2.24
VAPBO95292 RPL23AP32-201ENST00000395315 459 ntBASIC1.08□□□□□ -2.24
VAPBO95292 MTCYBP2-201ENST00000407745 171 ntBASIC1.08□□□□□ -2.24
VAPBO95292 AL161935.2-201ENST00000414627 60 ntBASIC1.08□□□□□ -2.24
VAPBO95292 MTND1P30-201ENST00000441241 901 ntBASIC1.08□□□□□ -2.24
VAPBO95292 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.08□□□□□ -2.24
VAPBO95292 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.08□□□□□ -2.24
VAPBO95292 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.08□□□□□ -2.24
VAPBO95292 snoU13.30-201ENST00000458951 104 ntBASIC1.08□□□□□ -2.24
VAPBO95292 UBE2V1P12-201ENST00000503954 474 ntBASIC1.08□□□□□ -2.24
VAPBO95292 AC116562.3-201ENST00000506136 177 ntBASIC1.08□□□□□ -2.24
VAPBO95292 AC108078.1-201ENST00000508073 725 ntBASIC1.08□□□□□ -2.24
VAPBO95292 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.08□□□□□ -2.24
VAPBO95292 RNA5SP437-201ENST00000517249 129 ntBASIC1.08□□□□□ -2.24
VAPBO95292 AC109479.2-201ENST00000517842 174 ntBASIC1.08□□□□□ -2.24
VAPBO95292 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.08□□□□□ -2.24
VAPBO95292 AC068587.5-201ENST00000528506 175 ntBASIC1.08□□□□□ -2.24
VAPBO95292 MIR4769-201ENST00000584126 77 ntBASIC1.08□□□□□ -2.24
VAPBO95292 HMGN1P30-201ENST00000589286 268 ntBASIC1.08□□□□□ -2.24
VAPBO95292 AC018714.1-201ENST00000605028 208 ntBASIC1.08□□□□□ -2.24
VAPBO95292 MIR6078-201ENST00000611069 100 ntBASIC1.08□□□□□ -2.24
VAPBO95292 AC104010.1-201ENST00000616889 150 ntBASIC1.08□□□□□ -2.24
VAPBO95292 AC092140.2-201ENST00000618027 521 ntBASIC1.08□□□□□ -2.24
VAPBO95292 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.08□□□□□ -2.24
VAPBO95292 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
VAPBO95292 U3.9-201ENST00000363823 204 ntBASIC1.07□□□□□ -2.24
VAPBO95292 RNU6-1019P-201ENST00000364424 107 ntBASIC1.07□□□□□ -2.24
VAPBO95292 RNU6-43P-201ENST00000384302 107 ntBASIC1.07□□□□□ -2.24
VAPBO95292 RNU6-1026P-201ENST00000384465 108 ntBASIC1.07□□□□□ -2.24
VAPBO95292 RNU6-45P-201ENST00000384471 107 ntBASIC1.07□□□□□ -2.24
VAPBO95292 RNU2-3P-201ENST00000410144 191 ntBASIC1.07□□□□□ -2.24
VAPBO95292 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.07□□□□□ -2.24
VAPBO95292 EIF1P1-201ENST00000421436 341 ntBASIC1.07□□□□□ -2.24
VAPBO95292 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.07□□□□□ -2.24
VAPBO95292 AC010975.2-201ENST00000427781 588 ntBASIC1.07□□□□□ -2.24
VAPBO95292 AL365184.2-201ENST00000431139 435 ntBASIC1.07□□□□□ -2.24
VAPBO95292 AC069257.2-201ENST00000441819 155 ntBASIC1.07□□□□□ -2.24
VAPBO95292 GAPDHP17-201ENST00000449858 1001 ntBASIC1.07□□□□□ -2.24
VAPBO95292 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.07□□□□□ -2.24
VAPBO95292 TOMM22P6-201ENST00000465035 409 ntBASIC1.07□□□□□ -2.24
VAPBO95292 ATP5EP1-201ENST00000510257 156 ntBASIC1.07□□□□□ -2.24
VAPBO95292 AC104136.1-201ENST00000512969 394 ntBASIC1.07□□□□□ -2.24
VAPBO95292 RNU5F-4P-201ENST00000516581 114 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms