Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SOX30O94993 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SOX30O94993 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SOX30O94993 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SOX30O94993 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SOX30O94993 MTND5P9-201ENST00000503854 1755 ntBASIC2.69□□□□□ -1.98
SOX30O94993 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.69□□□□□ -1.98
SOX30O94993 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SOX30O94993 MTND5P30-201ENST00000452896 1731 ntBASIC2.69□□□□□ -1.98
SOX30O94993 Y_RNA.123-201ENST00000363338 102 ntBASIC2.69□□□□□ -1.98
SOX30O94993 SNORA22B-201ENST00000383876 138 ntBASIC2.69□□□□□ -1.98
SOX30O94993 Y_RNA.428-201ENST00000384078 102 ntBASIC2.69□□□□□ -1.98
SOX30O94993 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.69□□□□□ -1.98
SOX30O94993 AC011816.1-201ENST00000441346 546 ntBASIC2.69□□□□□ -1.98
SOX30O94993 AL137792.2-201ENST00000443484 235 ntBASIC2.69□□□□□ -1.98
SOX30O94993 AL035666.1-201ENST00000446195 348 ntBASIC2.69□□□□□ -1.98
SOX30O94993 SNRPGP7-201ENST00000469016 106 ntBASIC2.69□□□□□ -1.98
SOX30O94993 AC107626.1-201ENST00000471084 183 ntBASIC2.69□□□□□ -1.98
SOX30O94993 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.69□□□□□ -1.98
SOX30O94993 RNU5F-8P-201ENST00000515941 111 ntBASIC2.69□□□□□ -1.98
SOX30O94993 ACA59.2-201ENST00000517061 156 ntBASIC2.69□□□□□ -1.98
SOX30O94993 RN7SKP295-201ENST00000517264 153 ntBASIC2.69□□□□□ -1.98
SOX30O94993 AC022634.1-201ENST00000520765 532 ntBASIC2.69□□□□□ -1.98
SOX30O94993 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.69□□□□□ -1.98
SOX30O94993 AC024581.2-201ENST00000619986 252 ntBASIC2.69□□□□□ -1.98
SOX30O94993 AL137790.1-201ENST00000634283 177 ntBASIC2.69□□□□□ -1.98
SOX30O94993 AC241585.2-209ENST00000638217 143 ntBASIC2.69□□□□□ -1.98
SOX30O94993 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
SOX30O94993 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SOX30O94993 Y_RNA.5-201ENST00000362334 102 ntBASIC2.68□□□□□ -1.98
SOX30O94993 Y_RNA.28-201ENST00000362554 111 ntBASIC2.68□□□□□ -1.98
SOX30O94993 Y_RNA.112-201ENST00000363250 102 ntBASIC2.68□□□□□ -1.98
SOX30O94993 CD24P4-201ENST00000382840 243 ntBASIC2.68□□□□□ -1.98
SOX30O94993 Y_RNA.422-201ENST00000384054 114 ntBASIC2.68□□□□□ -1.98
SOX30O94993 RNU6-301P-201ENST00000384277 107 ntBASIC2.68□□□□□ -1.98
SOX30O94993 Y_RNA.533-201ENST00000384596 114 ntBASIC2.68□□□□□ -1.98
SOX30O94993 AL139095.1-201ENST00000404326 391 ntBASIC2.68□□□□□ -1.98
SOX30O94993 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.68□□□□□ -1.98
SOX30O94993 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX30O94993 PMCHL1-202ENST00000423102 261 ntBASIC2.68□□□□□ -1.98
SOX30O94993 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX30O94993 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.68□□□□□ -1.98
SOX30O94993 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.68□□□□□ -1.98
SOX30O94993 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX30O94993 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.68□□□□□ -1.98
SOX30O94993 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.68□□□□□ -1.98
SOX30O94993 SCGB1D5P-201ENST00000515134 247 ntBASIC2.68□□□□□ -1.98
SOX30O94993 SNORD116.3-201ENST00000517176 78 ntBASIC2.68□□□□□ -1.98
SOX30O94993 SNORA31.21-201ENST00000517180 77 ntBASIC2.68□□□□□ -1.98
SOX30O94993 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX30O94993 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX30O94993 AC009163.5-201ENST00000575421 637 ntBASIC2.68□□□□□ -1.98
SOX30O94993 MIR3162-201ENST00000581818 82 ntBASIC2.68□□□□□ -1.98
SOX30O94993 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SOX30O94993 VN1R107P-201ENST00000601784 209 ntBASIC2.68□□□□□ -1.98
SOX30O94993 AC019159.1-201ENST00000605094 187 ntBASIC2.68□□□□□ -1.98
SOX30O94993 AC116312.1-201ENST00000606841 314 ntBASIC2.68□□□□□ -1.98
SOX30O94993 AC006157.1-201ENST00000611750 366 ntBASIC2.68□□□□□ -1.98
SOX30O94993 AC083806.3-201ENST00000614016 455 ntBASIC2.68□□□□□ -1.98
SOX30O94993 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.68□□□□□ -1.98
SOX30O94993 MIR3529-201ENST00000637713 78 ntBASIC2.68□□□□□ -1.98
SOX30O94993 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SOX30O94993 AC092435.3-201ENST00000565538 3654 ntBASIC2.67□□□□□ -1.98
SOX30O94993 AC009541.1-201ENST00000438279 2662 ntBASIC2.67□□□□□ -1.98
SOX30O94993 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.67□□□□□ -1.98
SOX30O94993 GABRG2-229ENST00000641017 3628 ntBASIC2.67□□□□□ -1.98
SOX30O94993 AC010680.1-201ENST00000590024 3590 ntBASIC2.67□□□□□ -1.98
SOX30O94993 RNY1P16-201ENST00000363063 111 ntBASIC2.67□□□□□ -1.98
SOX30O94993 RNU6-692P-201ENST00000384496 107 ntBASIC2.67□□□□□ -1.98
SOX30O94993 MIR606-201ENST00000384851 96 ntBASIC2.67□□□□□ -1.98
SOX30O94993 AL590004.2-201ENST00000404787 371 ntBASIC2.67□□□□□ -1.98
SOX30O94993 RN7SKP284-201ENST00000411002 343 ntBASIC2.67□□□□□ -1.98
SOX30O94993 AC023141.4-201ENST00000412031 328 ntBASIC2.67□□□□□ -1.98
SOX30O94993 AC074117.2-201ENST00000417130 397 ntBASIC2.67□□□□□ -1.98
SOX30O94993 AC243428.1-201ENST00000421099 264 ntBASIC2.67□□□□□ -1.98
SOX30O94993 NUP35P1-201ENST00000422734 947 ntBASIC2.67□□□□□ -1.98
SOX30O94993 EIF4EP2-201ENST00000422816 654 ntBASIC2.67□□□□□ -1.98
SOX30O94993 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.67□□□□□ -1.98
SOX30O94993 RPS29P6-201ENST00000438196 145 ntBASIC2.67□□□□□ -1.98
SOX30O94993 MTND4P19-201ENST00000446659 478 ntBASIC2.67□□□□□ -1.98
SOX30O94993 RPL17P19-201ENST00000489069 552 ntBASIC2.67□□□□□ -1.98
SOX30O94993 AIG1P1-201ENST00000503376 148 ntBASIC2.67□□□□□ -1.98
SOX30O94993 AC022447.4-201ENST00000504053 364 ntBASIC2.67□□□□□ -1.98
SOX30O94993 HSPE1P20-201ENST00000538133 289 ntBASIC2.67□□□□□ -1.98
SOX30O94993 CR383656.8-201ENST00000549046 145 ntBASIC2.67□□□□□ -1.98
SOX30O94993 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SOX30O94993 AP001836.1-201ENST00000604675 523 ntBASIC2.67□□□□□ -1.98
SOX30O94993 AL360085.1-201ENST00000604713 532 ntBASIC2.67□□□□□ -1.98
SOX30O94993 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SOX30O94993 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SOX30O94993 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.66□□□□□ -1.98
SOX30O94993 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.66□□□□□ -1.98
SOX30O94993 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SOX30O94993 RNA5SP126-201ENST00000365092 109 ntBASIC2.66□□□□□ -1.98
SOX30O94993 Y_RNA.314-201ENST00000365114 102 ntBASIC2.66□□□□□ -1.98
SOX30O94993 SNORA33.2-201ENST00000365413 134 ntBASIC2.66□□□□□ -1.98
SOX30O94993 RNU1-109P-201ENST00000383960 147 ntBASIC2.66□□□□□ -1.98
SOX30O94993 RNU6-639P-201ENST00000384074 107 ntBASIC2.66□□□□□ -1.98
SOX30O94993 RNU6-19P-201ENST00000384718 107 ntBASIC2.66□□□□□ -1.98
SOX30O94993 MIR544A-201ENST00000384855 91 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms