Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
VAMP4O75379 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.91□□□□□ -1.78
VAMP4O75379 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VAMP4O75379 MIR22-201ENST00000362190 85 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 Y_RNA.358-201ENST00000365491 99 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 RNY3P4-201ENST00000384428 101 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 SNORA48.2-201ENST00000390926 124 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 RPL21P75-201ENST00000396599 483 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VAMP4O75379 RPL21P28-201ENST00000401418 483 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 AL590556.1-201ENST00000423231 483 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 AL591043.1-201ENST00000432461 424 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VAMP4O75379 snoU13.30-201ENST00000458951 104 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 RPL21P39-201ENST00000463605 483 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 AC087190.1-201ENST00000484462 480 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 AC107032.1-201ENST00000485945 480 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 AC132942.1-201ENST00000486753 483 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 AC093591.1-201ENST00000491435 481 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 RPL21P16-201ENST00000495531 483 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 ANXA2P1-201ENST00000505539 926 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 AC067942.3-201ENST00000512025 362 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 RNU6-1023P-201ENST00000516137 106 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 Y_RNA.713-201ENST00000517013 96 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 AC141273.2-201ENST00000618989 130 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
VAMP4O75379 AC009541.1-201ENST00000438279 2662 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 AC233981.2-201ENST00000611524 1614 ntBASIC3.91□□□□□ -1.78
VAMP4O75379 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.91□□□□□ -1.78
VAMP4O75379 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
VAMP4O75379 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VAMP4O75379 AC110774.1-201ENST00000623567 2018 ntBASIC3.9□□□□□ -1.78
VAMP4O75379 AL035425.3-201ENST00000564206 4996 ntBASIC3.9□□□□□ -1.78
VAMP4O75379 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VAMP4O75379 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
VAMP4O75379 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
VAMP4O75379 RNU6-805P-201ENST00000365643 106 ntBASIC3.9□□□□□ -1.79
VAMP4O75379 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
VAMP4O75379 SNORA48.8-201ENST00000391324 134 ntBASIC3.9□□□□□ -1.79
VAMP4O75379 RNU6-130P-201ENST00000411112 103 ntBASIC3.9□□□□□ -1.79
VAMP4O75379 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.9□□□□□ -1.79
VAMP4O75379 EIF1AXP1-201ENST00000419267 435 ntBASIC3.9□□□□□ -1.79
VAMP4O75379 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.9□□□□□ -1.79
VAMP4O75379 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.9□□□□□ -1.79
VAMP4O75379 ARL5AP4-201ENST00000430731 512 ntBASIC3.9□□□□□ -1.79
VAMP4O75379 AC243964.1-201ENST00000441814 261 ntBASIC3.9□□□□□ -1.79
VAMP4O75379 AC117440.1-201ENST00000474107 571 ntBASIC3.9□□□□□ -1.79
VAMP4O75379 AC107222.1-201ENST00000510899 637 ntBASIC3.9□□□□□ -1.79
VAMP4O75379 NACAP3-201ENST00000552100 481 ntBASIC3.9□□□□□ -1.79
VAMP4O75379 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.9□□□□□ -1.79
VAMP4O75379 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.9□□□□□ -1.79
VAMP4O75379 MIR4325-201ENST00000583049 90 ntBASIC3.9□□□□□ -1.79
VAMP4O75379 AC006111.3-201ENST00000622137 383 ntBASIC3.9□□□□□ -1.79
VAMP4O75379 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VAMP4O75379 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
VAMP4O75379 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
VAMP4O75379 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
VAMP4O75379 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.89□□□□□ -1.79
VAMP4O75379 MIR422A-201ENST00000362286 90 ntBASIC3.89□□□□□ -1.79
VAMP4O75379 RNU6-884P-201ENST00000363889 107 ntBASIC3.89□□□□□ -1.79
VAMP4O75379 RNU6-1035P-201ENST00000384477 107 ntBASIC3.89□□□□□ -1.79
VAMP4O75379 YPEL5P1-201ENST00000419731 367 ntBASIC3.89□□□□□ -1.79
VAMP4O75379 AL358453.1-201ENST00000422522 250 ntBASIC3.89□□□□□ -1.79
VAMP4O75379 TMEM167AP1-201ENST00000423409 219 ntBASIC3.89□□□□□ -1.79
VAMP4O75379 SDAD1P3-201ENST00000427380 333 ntBASIC3.89□□□□□ -1.79
VAMP4O75379 AC125238.1-201ENST00000448842 249 ntBASIC3.89□□□□□ -1.79
VAMP4O75379 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.89□□□□□ -1.79
VAMP4O75379 RPL39P38-201ENST00000467018 153 ntBASIC3.89□□□□□ -1.79
VAMP4O75379 RPL23AP75-201ENST00000491601 451 ntBASIC3.89□□□□□ -1.79
VAMP4O75379 RNA5SP341-201ENST00000516261 117 ntBASIC3.89□□□□□ -1.79
VAMP4O75379 Y_RNA.680-201ENST00000516441 93 ntBASIC3.89□□□□□ -1.79
VAMP4O75379 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.89□□□□□ -1.79
VAMP4O75379 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.89□□□□□ -1.79
VAMP4O75379 SCARNA4-201ENST00000629045 128 ntBASIC3.89□□□□□ -1.79
VAMP4O75379 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VAMP4O75379 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VAMP4O75379 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
VAMP4O75379 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.88□□□□□ -1.79
VAMP4O75379 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VAMP4O75379 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VAMP4O75379 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
VAMP4O75379 MIR148B-201ENST00000362252 99 ntBASIC3.88□□□□□ -1.79
VAMP4O75379 RNU6-1093P-201ENST00000391194 107 ntBASIC3.88□□□□□ -1.79
VAMP4O75379 RNU6-121P-201ENST00000410525 99 ntBASIC3.88□□□□□ -1.79
VAMP4O75379 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.88□□□□□ -1.79
VAMP4O75379 AL031659.1-201ENST00000447075 539 ntBASIC3.88□□□□□ -1.79
VAMP4O75379 TRBVB-201ENST00000477100 408 ntBASIC3.88□□□□□ -1.79
VAMP4O75379 AC010469.2-201ENST00000496412 480 ntBASIC3.88□□□□□ -1.79
VAMP4O75379 MTND1P19-201ENST00000511780 315 ntBASIC3.88□□□□□ -1.79
VAMP4O75379 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.88□□□□□ -1.79
VAMP4O75379 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.88□□□□□ -1.79
VAMP4O75379 AC016256.1-201ENST00000547971 354 ntBASIC3.88□□□□□ -1.79
VAMP4O75379 AC090617.3-201ENST00000573670 475 ntBASIC3.88□□□□□ -1.79
VAMP4O75379 MIR3128-201ENST00000581957 66 ntBASIC3.88□□□□□ -1.79
VAMP4O75379 AC002076.2-201ENST00000617362 122 ntBASIC3.88□□□□□ -1.79
VAMP4O75379 AC024581.2-201ENST00000619986 252 ntBASIC3.88□□□□□ -1.79
VAMP4O75379 AC078938.1-201ENST00000620993 318 ntBASIC3.88□□□□□ -1.79
VAMP4O75379 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VAMP4O75379 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms