Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.5□□□□□ -1.69
GFRA3O60609 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
GFRA3O60609 RNU6-633P-201ENST00000362612 103 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 RNU6-509P-201ENST00000363519 107 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 SNORA73.2-201ENST00000364946 201 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 RN7SKP186-201ENST00000365371 303 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
GFRA3O60609 SNORA67.2-201ENST00000384300 149 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 PTMAP5-201ENST00000393073 333 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.5□□□□□ -1.69
GFRA3O60609 AL365496.1-201ENST00000426885 215 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 AC018634.1-201ENST00000437554 401 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 AL354710.1-201ENST00000453641 246 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.5□□□□□ -1.69
GFRA3O60609 AC093663.1-201ENST00000497190 394 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 RNU1-103P-201ENST00000516502 125 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.5□□□□□ -1.69
GFRA3O60609 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA3O60609 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA3O60609 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA3O60609 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
GFRA3O60609 MAPK10-320ENST00000641462 6696 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA3O60609 ADAM3A-203ENST00000461344 2157 ntBASIC4.5□□□□□ -1.69
GFRA3O60609 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.5□□□□□ -1.69
GFRA3O60609 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA3O60609 MAPK10-328ENST00000641553 4009 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GFRA3O60609 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
GFRA3O60609 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.49□□□□□ -1.69
GFRA3O60609 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GFRA3O60609 MAPK10-304ENST00000641341 3984 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GFRA3O60609 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.49□□□□□ -1.69
GFRA3O60609 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
GFRA3O60609 MARK2P15-201ENST00000432204 2186 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 RNU1-75P-201ENST00000347264 129 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 RNA5SP124-201ENST00000362739 110 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 RNU6-832P-201ENST00000363319 107 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 Y_RNA.454-201ENST00000384224 113 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 MIR577-201ENST00000385196 96 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 AC007919.1-201ENST00000429380 217 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.49□□□□□ -1.69
GFRA3O60609 SNORD11-201ENST00000459124 84 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.49□□□□□ -1.69
GFRA3O60609 RN7SL558P-201ENST00000497468 299 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 RNU1-117P-201ENST00000517041 158 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 TVP23BP1-201ENST00000557500 617 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.49□□□□□ -1.69
GFRA3O60609 AC005000.2-201ENST00000605468 310 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 U7.4-201ENST00000614961 63 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 AC091304.10-201ENST00000641554 121 ntBASIC4.49□□□□□ -1.69
GFRA3O60609 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GFRA3O60609 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GFRA3O60609 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
GFRA3O60609 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
GFRA3O60609 AL672167.1-204ENST00000641875 3017 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
GFRA3O60609 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.48□□□□□ -1.69
GFRA3O60609 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
GFRA3O60609 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.48□□□□□ -1.69
GFRA3O60609 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA3O60609 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
GFRA3O60609 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA3O60609 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA3O60609 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
GFRA3O60609 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
GFRA3O60609 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
GFRA3O60609 Y_RNA.298-201ENST00000364960 107 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 RNU6-1138P-201ENST00000365359 106 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 Y_RNA.531-201ENST00000384589 121 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 SNRPGP10-201ENST00000432323 225 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 AC090255.1-201ENST00000495779 349 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 AC083906.5-201ENST00000503722 328 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 RNU6-1256P-201ENST00000516539 103 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 SUMO2P16-201ENST00000519475 264 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 CKS1BP7-201ENST00000522230 235 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
GFRA3O60609 RPL23AP91-201ENST00000569211 455 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 MIR4694-201ENST00000578534 80 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 RN7SL600P-201ENST00000581811 299 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 MIR5195-201ENST00000583555 115 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 AC113403.1-201ENST00000604910 193 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.48□□□□□ -1.69
GFRA3O60609 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
GFRA3O60609 AC009093.8-201ENST00000641769 292 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.48□□□□□ -1.69
GFRA3O60609 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA3O60609 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA3O60609 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA3O60609 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.48□□□□□ -1.69
GFRA3O60609 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 AC004944.1-201ENST00000517807 3059 ntBASIC4.48□□□□□ -1.69
GFRA3O60609 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA3O60609 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA3O60609 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GFRA3O60609 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.48□□□□□ -1.69
GFRA3O60609 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms