Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC090971.5-201ENST00000621102 293 ntBASIC2.54□□□□□ -2
ZIC3O60481 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.54□□□□□ -2
ZIC3O60481 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.54□□□□□ -2
ZIC3O60481 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZIC3O60481 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.54□□□□□ -2
ZIC3O60481 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
ZIC3O60481 SNORD114-19-201ENST00000363072 75 ntBASIC2.53□□□□□ -2
ZIC3O60481 Y_RNA.197-201ENST00000364004 102 ntBASIC2.53□□□□□ -2
ZIC3O60481 DYNLT3P1-201ENST00000378574 347 ntBASIC2.53□□□□□ -2
ZIC3O60481 RNU6-1083P-201ENST00000384022 107 ntBASIC2.53□□□□□ -2
ZIC3O60481 MIR559-201ENST00000385188 96 ntBASIC2.53□□□□□ -2
ZIC3O60481 MIR634-201ENST00000385208 97 ntBASIC2.53□□□□□ -2
ZIC3O60481 AC104332.2-201ENST00000429959 156 ntBASIC2.53□□□□□ -2
ZIC3O60481 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.53□□□□□ -2
ZIC3O60481 AC105272.1-201ENST00000438604 198 ntBASIC2.53□□□□□ -2
ZIC3O60481 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.53□□□□□ -2
ZIC3O60481 MTCYBP6-201ENST00000441810 138 ntBASIC2.53□□□□□ -2
ZIC3O60481 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.53□□□□□ -2
ZIC3O60481 AP004217.1-201ENST00000480579 346 ntBASIC2.53□□□□□ -2
ZIC3O60481 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.53□□□□□ -2
ZIC3O60481 RNU6-470P-201ENST00000515954 104 ntBASIC2.53□□□□□ -2
ZIC3O60481 RNU6-120P-201ENST00000516077 103 ntBASIC2.53□□□□□ -2
ZIC3O60481 AC109329.1-201ENST00000518744 317 ntBASIC2.53□□□□□ -2
ZIC3O60481 HSPE1P4-201ENST00000550617 308 ntBASIC2.53□□□□□ -2
ZIC3O60481 GTF3AP2-201ENST00000557014 266 ntBASIC2.53□□□□□ -2
ZIC3O60481 AC105137.2-201ENST00000569073 466 ntBASIC2.53□□□□□ -2
ZIC3O60481 MIR7106-201ENST00000612419 65 ntBASIC2.53□□□□□ -2
ZIC3O60481 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ZIC3O60481 AC007792.1-201ENST00000623023 402 ntBASIC2.53□□□□□ -2
ZIC3O60481 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
ZIC3O60481 AC009487.2-201ENST00000420969 6821 ntBASIC2.53□□□□□ -2
ZIC3O60481 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.53□□□□□ -2
ZIC3O60481 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ZIC3O60481 ZNF299P-201ENST00000406845 1804 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.52□□□□□ -2.01
ZIC3O60481 MTND5P30-201ENST00000452896 1731 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 MIR369-201ENST00000362155 70 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 Y_RNA.40-201ENST00000362645 93 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 RNU6-595P-201ENST00000363944 107 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 RNU1-112P-201ENST00000364401 164 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 RNU6-1227P-201ENST00000383981 107 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 RNU6-474P-201ENST00000384243 107 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 RNU6-1011P-201ENST00000384668 107 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 AL031121.1-201ENST00000406553 254 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.52□□□□□ -2.01
ZIC3O60481 AL451074.5-201ENST00000415894 435 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 AC138623.1-201ENST00000418060 216 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 AC078809.1-201ENST00000427601 140 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 Z98742.2-201ENST00000431564 187 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 MIR2053-201ENST00000459295 91 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 snoU13.14-201ENST00000459372 104 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 AC112771.1-201ENST00000463581 102 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 RPL36AP48-201ENST00000485521 314 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.52□□□□□ -2.01
ZIC3O60481 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.52□□□□□ -2.01
ZIC3O60481 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.52□□□□□ -2.01
ZIC3O60481 AP000889.1-201ENST00000530968 660 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 MRPS36P4-201ENST00000534436 298 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
ZIC3O60481 AC078899.3-201ENST00000599065 212 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.52□□□□□ -2.01
ZIC3O60481 AL450472.1-202ENST00000637286 180 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.52□□□□□ -2.01
ZIC3O60481 AL359854.1-201ENST00000614203 1594 ntBASIC2.52□□□□□ -2.01
ZIC3O60481 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.52□□□□□ -2.01
ZIC3O60481 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ZIC3O60481 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.51□□□□□ -2.01
ZIC3O60481 AP000560.1-201ENST00000624150 1937 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 RNU6-1115P-201ENST00000362490 106 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 SNORA68.1-201ENST00000364537 132 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 RNU6-1286P-201ENST00000383871 107 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 MIR181A2-201ENST00000384863 110 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 SNORA26.3-201ENST00000391119 136 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 AL138827.1-201ENST00000402666 306 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 RNU6-1328P-201ENST00000410938 106 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 EIF1AXP1-201ENST00000419267 435 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 AC097463.2-201ENST00000421074 142 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 AIMP1P2-201ENST00000425294 312 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 RPL23AP50-201ENST00000434149 455 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 AC244670.1-201ENST00000436879 112 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 AL513124.1-201ENST00000450410 614 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 SNRPGP7-201ENST00000469016 106 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 RPL30P1-201ENST00000488676 339 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 AC104564.1-201ENST00000493028 407 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 AC022493.2-201ENST00000506122 481 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 SEM1P1-201ENST00000506694 209 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.51□□□□□ -2.01
ZIC3O60481 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.51□□□□□ -2.01
ZIC3O60481 AC016256.1-201ENST00000547971 354 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.51□□□□□ -2.01
ZIC3O60481 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.51□□□□□ -2.01
ZIC3O60481 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.51□□□□□ -2.01
ZIC3O60481 MIR5571-201ENST00000577998 113 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 MIR5701-3-201ENST00000578890 82 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 MIR5701-1-201ENST00000585138 82 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 ZNF861P-201ENST00000588126 639 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 MIR5701-2-201ENST00000615634 82 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 uc_338.22-201ENST00000622722 187 ntBASIC2.51□□□□□ -2.01
ZIC3O60481 AC134503.1-201ENST00000633048 54 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms