Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 SNORA31.23-201ENST00000517219 133 ntBASIC2.43□□□□□ -2.02
PRKNO60260 AC093249.1-201ENST00000567049 203 ntBASIC2.43□□□□□ -2.02
PRKNO60260 MTCO3P13-201ENST00000577757 781 ntBASIC2.43□□□□□ -2.02
PRKNO60260 BNIP3P16-201ENST00000589779 534 ntBASIC2.43□□□□□ -2.02
PRKNO60260 AC010620.2-201ENST00000600135 313 ntBASIC2.43□□□□□ -2.02
PRKNO60260 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.43□□□□□ -2.02
PRKNO60260 AC133104.2-201ENST00000615272 193 ntBASIC2.43□□□□□ -2.02
PRKNO60260 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
PRKNO60260 AC090971.5-201ENST00000621102 293 ntBASIC2.43□□□□□ -2.02
PRKNO60260 AC110079.1-202ENST00000635213 138 ntBASIC2.43□□□□□ -2.02
PRKNO60260 MIR3529-201ENST00000637713 78 ntBASIC2.43□□□□□ -2.02
PRKNO60260 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRKNO60260 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRKNO60260 RBBP8P1-201ENST00000449447 1844 ntBASIC2.42□□□□□ -2.02
PRKNO60260 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PRKNO60260 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
PRKNO60260 MIR369-201ENST00000362155 70 ntBASIC2.42□□□□□ -2.02
PRKNO60260 Y_RNA.138-201ENST00000363462 102 ntBASIC2.42□□□□□ -2.02
PRKNO60260 Y_RNA.146-201ENST00000363549 102 ntBASIC2.42□□□□□ -2.02
PRKNO60260 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRKNO60260 RNU6-890P-201ENST00000384121 107 ntBASIC2.42□□□□□ -2.02
PRKNO60260 RNU6-843P-201ENST00000384454 104 ntBASIC2.42□□□□□ -2.02
PRKNO60260 MIR147B-201ENST00000390185 80 ntBASIC2.42□□□□□ -2.02
PRKNO60260 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.42□□□□□ -2.02
PRKNO60260 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.42□□□□□ -2.02
PRKNO60260 USMG5P1-201ENST00000425964 177 ntBASIC2.42□□□□□ -2.02
PRKNO60260 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.42□□□□□ -2.02
PRKNO60260 RPL23AP50-201ENST00000434149 455 ntBASIC2.42□□□□□ -2.02
PRKNO60260 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.42□□□□□ -2.02
PRKNO60260 ELOCP24-201ENST00000456370 334 ntBASIC2.42□□□□□ -2.02
PRKNO60260 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.42□□□□□ -2.02
PRKNO60260 RNU7-152P-201ENST00000458982 64 ntBASIC2.42□□□□□ -2.02
PRKNO60260 SNRPGP7-201ENST00000469016 106 ntBASIC2.42□□□□□ -2.02
PRKNO60260 FO393415.2-201ENST00000480085 343 ntBASIC2.42□□□□□ -2.02
PRKNO60260 RN7SL499P-201ENST00000481141 276 ntBASIC2.42□□□□□ -2.02
PRKNO60260 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.42□□□□□ -2.02
PRKNO60260 AC114801.2-201ENST00000503825 781 ntBASIC2.42□□□□□ -2.02
PRKNO60260 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.42□□□□□ -2.02
PRKNO60260 RAC1P5-201ENST00000512182 576 ntBASIC2.42□□□□□ -2.02
PRKNO60260 AC096725.1-201ENST00000514266 313 ntBASIC2.42□□□□□ -2.02
PRKNO60260 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.42□□□□□ -2.02
PRKNO60260 RNU6-1170P-201ENST00000515974 106 ntBASIC2.42□□□□□ -2.02
PRKNO60260 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.42□□□□□ -2.02
PRKNO60260 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.42□□□□□ -2.02
PRKNO60260 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.42□□□□□ -2.02
PRKNO60260 HSPE1P20-201ENST00000538133 289 ntBASIC2.42□□□□□ -2.02
PRKNO60260 AC027176.1-201ENST00000560204 514 ntBASIC2.42□□□□□ -2.02
PRKNO60260 MIR4273-201ENST00000582824 84 ntBASIC2.42□□□□□ -2.02
PRKNO60260 MIR8076-201ENST00000611401 83 ntBASIC2.42□□□□□ -2.02
PRKNO60260 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.42□□□□□ -2.02
PRKNO60260 AC024581.2-201ENST00000619986 252 ntBASIC2.42□□□□□ -2.02
PRKNO60260 AC002064.3-201ENST00000623448 346 ntBASIC2.42□□□□□ -2.02
PRKNO60260 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
PRKNO60260 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.42□□□□□ -2.02
PRKNO60260 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.41□□□□□ -2.02
PRKNO60260 Y_RNA.48-201ENST00000362710 103 ntBASIC2.41□□□□□ -2.02
PRKNO60260 RNU6-227P-201ENST00000362865 103 ntBASIC2.41□□□□□ -2.02
PRKNO60260 Y_RNA.123-201ENST00000363338 102 ntBASIC2.41□□□□□ -2.02
PRKNO60260 Y_RNA.187-201ENST00000363918 113 ntBASIC2.41□□□□□ -2.02
PRKNO60260 SNORD21-201ENST00000383953 95 ntBASIC2.41□□□□□ -2.02
PRKNO60260 RNU6-748P-201ENST00000384648 107 ntBASIC2.41□□□□□ -2.02
PRKNO60260 MIR544A-201ENST00000384855 91 ntBASIC2.41□□□□□ -2.02
PRKNO60260 RNU6-1140P-201ENST00000410517 106 ntBASIC2.41□□□□□ -2.02
PRKNO60260 RNA5SP492-201ENST00000411330 114 ntBASIC2.41□□□□□ -2.02
PRKNO60260 BMS1P22-201ENST00000414726 313 ntBASIC2.41□□□□□ -2.02
PRKNO60260 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.41□□□□□ -2.02
PRKNO60260 BX276092.3-201ENST00000424182 230 ntBASIC2.41□□□□□ -2.02
PRKNO60260 RPS3P1-201ENST00000456781 192 ntBASIC2.41□□□□□ -2.02
PRKNO60260 MIR2053-201ENST00000459295 91 ntBASIC2.41□□□□□ -2.02
PRKNO60260 RPS29P27-201ENST00000463711 170 ntBASIC2.41□□□□□ -2.02
PRKNO60260 AP001025.1-201ENST00000486139 332 ntBASIC2.41□□□□□ -2.02
PRKNO60260 GZMAP1-201ENST00000503054 631 ntBASIC2.41□□□□□ -2.02
PRKNO60260 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.41□□□□□ -2.02
PRKNO60260 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.41□□□□□ -2.02
PRKNO60260 VN1R107P-201ENST00000601784 209 ntBASIC2.41□□□□□ -2.02
PRKNO60260 AP001836.1-201ENST00000604675 523 ntBASIC2.41□□□□□ -2.02
PRKNO60260 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.41□□□□□ -2.02
PRKNO60260 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
PRKNO60260 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PRKNO60260 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PRKNO60260 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
PRKNO60260 RNA5SP68-201ENST00000363885 119 ntBASIC2.4□□□□□ -2.03
PRKNO60260 BTF3L4P2-201ENST00000392798 346 ntBASIC2.4□□□□□ -2.03
PRKNO60260 RNU6-174P-201ENST00000410406 106 ntBASIC2.4□□□□□ -2.03
PRKNO60260 RPL19P1-201ENST00000411635 428 ntBASIC2.4□□□□□ -2.03
PRKNO60260 AP000275.1-201ENST00000411943 390 ntBASIC2.4□□□□□ -2.03
PRKNO60260 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.4□□□□□ -2.03
PRKNO60260 AC004383.1-201ENST00000438135 289 ntBASIC2.4□□□□□ -2.03
PRKNO60260 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.4□□□□□ -2.03
PRKNO60260 AC011816.1-201ENST00000441346 546 ntBASIC2.4□□□□□ -2.03
PRKNO60260 AC007969.2-201ENST00000441891 191 ntBASIC2.4□□□□□ -2.03
PRKNO60260 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.4□□□□□ -2.03
PRKNO60260 SMURF2P1-201ENST00000514992 481 ntBASIC2.4□□□□□ -2.03
PRKNO60260 RNU6-120P-201ENST00000516077 103 ntBASIC2.4□□□□□ -2.03
PRKNO60260 RNA5SP282-201ENST00000516355 108 ntBASIC2.4□□□□□ -2.03
PRKNO60260 RNA5SP148-201ENST00000516527 94 ntBASIC2.4□□□□□ -2.03
PRKNO60260 AC008739.2-201ENST00000597006 317 ntBASIC2.4□□□□□ -2.03
PRKNO60260 AC078795.3-201ENST00000602913 472 ntBASIC2.4□□□□□ -2.03
PRKNO60260 AL391813.1-201ENST00000603098 260 ntBASIC2.4□□□□□ -2.03
PRKNO60260 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms