Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MTND3P25-201ENST00000509243 135 ntBASIC0.99□□□□□ -2.25
SGCEO43556 RNA5SP437-201ENST00000517249 129 ntBASIC0.99□□□□□ -2.25
SGCEO43556 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.99□□□□□ -2.25
SGCEO43556 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.99□□□□□ -2.25
SGCEO43556 AC110760.3-201ENST00000598794 467 ntBASIC0.99□□□□□ -2.25
SGCEO43556 RNU4-5P-201ENST00000607255 135 ntBASIC0.99□□□□□ -2.25
SGCEO43556 AL139418.1-201ENST00000613613 177 ntBASIC0.99□□□□□ -2.25
SGCEO43556 AC083806.3-201ENST00000614016 455 ntBASIC0.99□□□□□ -2.25
SGCEO43556 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.99□□□□□ -2.25
SGCEO43556 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.99□□□□□ -2.25
SGCEO43556 Z69720.2-201ENST00000624755 279 ntBASIC0.99□□□□□ -2.25
SGCEO43556 AC099654.5-201ENST00000636479 350 ntBASIC0.99□□□□□ -2.25
SGCEO43556 AC006927.4-201ENST00000639187 543 ntBASIC0.99□□□□□ -2.25
SGCEO43556 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
SGCEO43556 RNU4-1-201ENST00000363925 141 ntBASIC0.98□□□□□ -2.25
SGCEO43556 SNORA32.2-201ENST00000384049 122 ntBASIC0.98□□□□□ -2.25
SGCEO43556 RNU6-533P-201ENST00000384144 107 ntBASIC0.98□□□□□ -2.25
SGCEO43556 MIR548B-201ENST00000385247 97 ntBASIC0.98□□□□□ -2.25
SGCEO43556 FGF7P8-201ENST00000402994 292 ntBASIC0.98□□□□□ -2.25
SGCEO43556 ARL5AP1-201ENST00000418991 388 ntBASIC0.98□□□□□ -2.25
SGCEO43556 ELOCP4-201ENST00000420090 333 ntBASIC0.98□□□□□ -2.25
SGCEO43556 SNX2P2-201ENST00000424553 323 ntBASIC0.98□□□□□ -2.25
SGCEO43556 CALM2P2-201ENST00000428512 440 ntBASIC0.98□□□□□ -2.25
SGCEO43556 AC099677.2-201ENST00000436385 175 ntBASIC0.98□□□□□ -2.25
SGCEO43556 AC243964.1-201ENST00000441814 261 ntBASIC0.98□□□□□ -2.25
SGCEO43556 DYNLT3P2-201ENST00000442517 295 ntBASIC0.98□□□□□ -2.25
SGCEO43556 PGBD4P5-201ENST00000445958 426 ntBASIC0.98□□□□□ -2.25
SGCEO43556 RPS29P28-201ENST00000446439 141 ntBASIC0.98□□□□□ -2.25
SGCEO43556 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.98□□□□□ -2.25
SGCEO43556 SNRPFP4-201ENST00000456366 242 ntBASIC0.98□□□□□ -2.25
SGCEO43556 AL163540.1-201ENST00000485382 386 ntBASIC0.98□□□□□ -2.25
SGCEO43556 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SGCEO43556 AC074344.1-201ENST00000512823 224 ntBASIC0.98□□□□□ -2.25
SGCEO43556 RNU6-377P-201ENST00000515965 102 ntBASIC0.98□□□□□ -2.25
SGCEO43556 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.98□□□□□ -2.25
SGCEO43556 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.98□□□□□ -2.25
SGCEO43556 CYP3A52P-201ENST00000563326 91 ntBASIC0.98□□□□□ -2.25
SGCEO43556 MIR3923-201ENST00000579521 83 ntBASIC0.98□□□□□ -2.25
SGCEO43556 AP003465.2-201ENST00000602571 373 ntBASIC0.98□□□□□ -2.25
SGCEO43556 AL590229.1-201ENST00000603497 542 ntBASIC0.98□□□□□ -2.25
SGCEO43556 AL158050.2-201ENST00000605336 568 ntBASIC0.98□□□□□ -2.25
SGCEO43556 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.98□□□□□ -2.25
SGCEO43556 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.97□□□□□ -2.25
SGCEO43556 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SGCEO43556 SNORA63D-201ENST00000364359 132 ntBASIC0.97□□□□□ -2.25
SGCEO43556 RNU6-61P-201ENST00000365528 109 ntBASIC0.97□□□□□ -2.25
SGCEO43556 RNU6-83P-201ENST00000384568 112 ntBASIC0.97□□□□□ -2.25
SGCEO43556 RNU6-1176P-201ENST00000390955 107 ntBASIC0.97□□□□□ -2.25
SGCEO43556 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
SGCEO43556 MTCYBP36-201ENST00000404146 440 ntBASIC0.97□□□□□ -2.25
SGCEO43556 OR6C66P-201ENST00000414917 930 ntBASIC0.97□□□□□ -2.25
SGCEO43556 AC245047.4-201ENST00000433189 144 ntBASIC0.97□□□□□ -2.25
SGCEO43556 AC244670.1-201ENST00000436879 112 ntBASIC0.97□□□□□ -2.25
SGCEO43556 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.97□□□□□ -2.25
SGCEO43556 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.97□□□□□ -2.25
SGCEO43556 AC132479.1-201ENST00000449160 144 ntBASIC0.97□□□□□ -2.25
SGCEO43556 snoU13.30-201ENST00000458951 104 ntBASIC0.97□□□□□ -2.25
SGCEO43556 ATP5EP1-201ENST00000510257 156 ntBASIC0.97□□□□□ -2.25
SGCEO43556 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.97□□□□□ -2.25
SGCEO43556 AC090888.2-201ENST00000559765 1144 ntBASIC0.97□□□□□ -2.25
SGCEO43556 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.97□□□□□ -2.25
SGCEO43556 MIR4295-201ENST00000585286 85 ntBASIC0.97□□□□□ -2.25
SGCEO43556 BNIP3P8-201ENST00000597863 560 ntBASIC0.97□□□□□ -2.25
SGCEO43556 AL031775.1-201ENST00000607014 887 ntBASIC0.97□□□□□ -2.25
SGCEO43556 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.97□□□□□ -2.25
SGCEO43556 MTND4P14-201ENST00000435799 1354 ntBASIC0.96□□□□□ -2.26
SGCEO43556 RNU6-862P-201ENST00000362804 105 ntBASIC0.96□□□□□ -2.26
SGCEO43556 SNORD31B-201ENST00000364977 69 ntBASIC0.96□□□□□ -2.26
SGCEO43556 RNU2-3P-201ENST00000410144 191 ntBASIC0.96□□□□□ -2.26
SGCEO43556 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.96□□□□□ -2.26
SGCEO43556 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.96□□□□□ -2.26
SGCEO43556 AL590135.1-201ENST00000422215 156 ntBASIC0.96□□□□□ -2.26
SGCEO43556 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SGCEO43556 AC019205.3-201ENST00000424573 156 ntBASIC0.96□□□□□ -2.26
SGCEO43556 AC078809.1-201ENST00000427601 140 ntBASIC0.96□□□□□ -2.26
SGCEO43556 MTCO3P29-201ENST00000432119 779 ntBASIC0.96□□□□□ -2.26
SGCEO43556 AC016700.2-201ENST00000446011 156 ntBASIC0.96□□□□□ -2.26
SGCEO43556 AC007395.1-201ENST00000451333 677 ntBASIC0.96□□□□□ -2.26
SGCEO43556 AC015911.1-201ENST00000495111 156 ntBASIC0.96□□□□□ -2.26
SGCEO43556 HSPE1P23-201ENST00000509838 286 ntBASIC0.96□□□□□ -2.26
SGCEO43556 RNU6-685P-201ENST00000517088 95 ntBASIC0.96□□□□□ -2.26
SGCEO43556 RNA5SP404-201ENST00000517118 132 ntBASIC0.96□□□□□ -2.26
SGCEO43556 AC109479.2-201ENST00000517842 174 ntBASIC0.96□□□□□ -2.26
SGCEO43556 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.96□□□□□ -2.26
SGCEO43556 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.96□□□□□ -2.26
SGCEO43556 BNIP3P16-201ENST00000589779 534 ntBASIC0.96□□□□□ -2.26
SGCEO43556 AL356157.2-201ENST00000605122 111 ntBASIC0.96□□□□□ -2.26
SGCEO43556 RPL17P51-201ENST00000605218 238 ntBASIC0.96□□□□□ -2.26
SGCEO43556 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
SGCEO43556 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.96□□□□□ -2.26
SGCEO43556 AC092140.2-201ENST00000618027 521 ntBASIC0.96□□□□□ -2.26
SGCEO43556 AC019226.2-201ENST00000625973 424 ntBASIC0.96□□□□□ -2.26
SGCEO43556 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SGCEO43556 RNU6-179P-201ENST00000363350 107 ntBASIC0.95□□□□□ -2.26
SGCEO43556 U3.9-201ENST00000363823 204 ntBASIC0.95□□□□□ -2.26
SGCEO43556 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
SGCEO43556 SNORA29-201ENST00000384183 140 ntBASIC0.95□□□□□ -2.26
SGCEO43556 RNU6-43P-201ENST00000384302 107 ntBASIC0.95□□□□□ -2.26
SGCEO43556 RNU6-906P-201ENST00000384700 70 ntBASIC0.95□□□□□ -2.26
SGCEO43556 RNU6-293P-201ENST00000411259 106 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms