Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.84□□□□□ -1.79
SRGAP3O43295 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
SRGAP3O43295 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.84□□□□□ -1.79
SRGAP3O43295 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SRGAP3O43295 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SRGAP3O43295 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SRGAP3O43295 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
SRGAP3O43295 Y_RNA.180-201ENST00000363867 113 ntBASIC3.84□□□□□ -1.79
SRGAP3O43295 Y_RNA.200-201ENST00000364018 102 ntBASIC3.84□□□□□ -1.79
SRGAP3O43295 RNU6-937P-201ENST00000384325 106 ntBASIC3.84□□□□□ -1.79
SRGAP3O43295 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SRGAP3O43295 SNORD78.2-201ENST00000391076 69 ntBASIC3.84□□□□□ -1.79
SRGAP3O43295 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.84□□□□□ -1.79
SRGAP3O43295 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.84□□□□□ -1.79
SRGAP3O43295 AC245291.1-201ENST00000419501 328 ntBASIC3.84□□□□□ -1.79
SRGAP3O43295 AC104332.1-201ENST00000440471 797 ntBASIC3.84□□□□□ -1.79
SRGAP3O43295 AC125238.1-201ENST00000448842 249 ntBASIC3.84□□□□□ -1.79
SRGAP3O43295 MED28P2-201ENST00000475771 317 ntBASIC3.84□□□□□ -1.79
SRGAP3O43295 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.84□□□□□ -1.79
SRGAP3O43295 SNORA70.16-201ENST00000516390 95 ntBASIC3.84□□□□□ -1.79
SRGAP3O43295 RNU6-406P-201ENST00000516470 107 ntBASIC3.84□□□□□ -1.79
SRGAP3O43295 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.84□□□□□ -1.79
SRGAP3O43295 AC090617.3-201ENST00000573670 475 ntBASIC3.84□□□□□ -1.79
SRGAP3O43295 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.84□□□□□ -1.79
SRGAP3O43295 AC240442.1-201ENST00000616055 283 ntBASIC3.84□□□□□ -1.79
SRGAP3O43295 AC027309.3-201ENST00000623419 351 ntBASIC3.84□□□□□ -1.79
SRGAP3O43295 AC097372.5-201ENST00000623665 376 ntBASIC3.84□□□□□ -1.79
SRGAP3O43295 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.84□□□□□ -1.8
SRGAP3O43295 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SRGAP3O43295 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
SRGAP3O43295 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
SRGAP3O43295 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
SRGAP3O43295 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.8
SRGAP3O43295 AL359693.1-201ENST00000614959 2407 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SRGAP3O43295 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SRGAP3O43295 RNU6-774P-201ENST00000363238 107 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 RNU6-527P-201ENST00000363425 104 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 SNORD113-8-201ENST00000363497 74 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 RNY1-201ENST00000364228 113 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 RNU6-72P-201ENST00000384285 79 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 Y_RNA.581-201ENST00000391017 97 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 MIR1298-201ENST00000408783 112 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 RPL32P35-201ENST00000415214 394 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 AL358453.1-201ENST00000422522 250 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.83□□□□□ -1.8
SRGAP3O43295 RPL23AP83-201ENST00000434984 473 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 AC124916.1-201ENST00000444020 547 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 AL138752.1-201ENST00000452964 351 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 snoU13.30-201ENST00000458951 104 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.83□□□□□ -1.8
SRGAP3O43295 RPL23AP49-201ENST00000492925 468 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.83□□□□□ -1.8
SRGAP3O43295 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.83□□□□□ -1.8
SRGAP3O43295 RNU6-789P-201ENST00000517105 102 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 TRAV28-201ENST00000557548 323 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 MIR4659A-201ENST00000580269 81 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 SCARNA4-202ENST00000625402 129 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SRGAP3O43295 SRP72P2-201ENST00000344851 1979 ntBASIC3.83□□□□□ -1.8
SRGAP3O43295 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.83□□□□□ -1.8
SRGAP3O43295 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.83□□□□□ -1.8
SRGAP3O43295 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SRGAP3O43295 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.82□□□□□ -1.8
SRGAP3O43295 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SRGAP3O43295 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SRGAP3O43295 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.82□□□□□ -1.8
SRGAP3O43295 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.82□□□□□ -1.8
SRGAP3O43295 RNA5SP383-201ENST00000362934 120 ntBASIC3.82□□□□□ -1.8
SRGAP3O43295 RNU4-9P-201ENST00000364951 139 ntBASIC3.82□□□□□ -1.8
SRGAP3O43295 RNU6-926P-201ENST00000384075 107 ntBASIC3.82□□□□□ -1.8
SRGAP3O43295 RNU6-968P-201ENST00000384076 107 ntBASIC3.82□□□□□ -1.8
SRGAP3O43295 RNU6-102P-201ENST00000384485 104 ntBASIC3.82□□□□□ -1.8
SRGAP3O43295 Y_RNA.793-201ENST00000411222 111 ntBASIC3.82□□□□□ -1.8
SRGAP3O43295 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.82□□□□□ -1.8
SRGAP3O43295 SNRPEP9-201ENST00000436794 238 ntBASIC3.82□□□□□ -1.8
SRGAP3O43295 SERF1AP1-201ENST00000514575 187 ntBASIC3.82□□□□□ -1.8
SRGAP3O43295 MRPS36P4-201ENST00000534436 298 ntBASIC3.82□□□□□ -1.8
SRGAP3O43295 MIR4782-201ENST00000577987 79 ntBASIC3.82□□□□□ -1.8
SRGAP3O43295 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.82□□□□□ -1.8
SRGAP3O43295 AL353743.1-202ENST00000431724 1695 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 AL021368.2-201ENST00000606125 5352 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SRGAP3O43295 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRGAP3O43295 AL157777.2-201ENST00000258070 137 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 MIR422A-201ENST00000362286 90 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 RNU6-1301P-201ENST00000362724 104 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 RNU6-105P-201ENST00000363909 104 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 SNORA19-201ENST00000384737 128 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 MIR325-201ENST00000385260 98 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 RN7SKP220-201ENST00000410611 288 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.81□□□□□ -1.8
SRGAP3O43295 AL353705.4-201ENST00000449661 238 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.81□□□□□ -1.8
SRGAP3O43295 RPS26P21-201ENST00000475397 348 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 RPS23P5-201ENST00000495419 428 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 AC010265.1-201ENST00000513509 211 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 RNA5SP341-201ENST00000516261 117 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 SNORA31.8-201ENST00000516327 108 ntBASIC3.81□□□□□ -1.8
SRGAP3O43295 SNORA74D-201ENST00000516404 141 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms