Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.8□□□□□ -1.96
NPHP1O15259 AP000763.2-201ENST00000540641 163 ntBASIC2.8□□□□□ -1.96
NPHP1O15259 NDUFA5P6-201ENST00000542110 379 ntBASIC2.8□□□□□ -1.96
NPHP1O15259 AF250324.2-201ENST00000608299 610 ntBASIC2.8□□□□□ -1.96
NPHP1O15259 AL161423.1-201ENST00000613700 262 ntBASIC2.8□□□□□ -1.96
NPHP1O15259 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NPHP1O15259 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NPHP1O15259 SNORD116-4-201ENST00000384733 96 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 RNU6-908P-201ENST00000410160 94 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 RNA5SP270-201ENST00000411361 118 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 ARL5AP1-201ENST00000418991 388 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.79□□□□□ -1.96
NPHP1O15259 AL031659.1-201ENST00000447075 539 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 SNRPGP7-201ENST00000469016 106 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.79□□□□□ -1.96
NPHP1O15259 HMGB1P35-201ENST00000503360 598 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 AC022447.4-201ENST00000504053 364 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.79□□□□□ -1.96
NPHP1O15259 AC018630.3-201ENST00000542637 96 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 AC018889.1-201ENST00000605372 397 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NPHP1O15259 MIR6895-201ENST00000613497 78 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 AC022202.1-201ENST00000613515 211 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 AC012640.5-201ENST00000623897 319 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 AP000560.1-201ENST00000624150 1937 ntBASIC2.79□□□□□ -1.96
NPHP1O15259 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NPHP1O15259 Y_RNA.231-201ENST00000364358 102 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 U8.8-201ENST00000365399 135 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 SNORD23.1-201ENST00000408212 104 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 RNU2-32P-201ENST00000411193 191 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 HMGB3P2-201ENST00000411913 584 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 AF274854.1-201ENST00000413236 615 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.78□□□□□ -1.96
NPHP1O15259 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NPHP1O15259 MTCO2P3-201ENST00000442543 421 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 RPL38P4-201ENST00000502376 214 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 RNU6-720P-201ENST00000516363 108 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 RNU6-314P-201ENST00000516574 104 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 RNA5SP137-201ENST00000516833 135 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 RNU6-667P-201ENST00000517186 102 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 AP005597.4-201ENST00000526762 229 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.78□□□□□ -1.96
NPHP1O15259 EIF1P4-201ENST00000572664 335 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.78□□□□□ -1.96
NPHP1O15259 AL034555.1-201ENST00000604816 211 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 AL356157.2-201ENST00000605122 111 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 MIR6766-201ENST00000622641 72 ntBASIC2.78□□□□□ -1.96
NPHP1O15259 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NPHP1O15259 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NPHP1O15259 Y_RNA.140-201ENST00000363474 103 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 RNU1-51P-201ENST00000365345 176 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 RNU6-546P-201ENST00000383991 107 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 RPL23AP95-201ENST00000426806 265 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 AC244670.1-201ENST00000436879 112 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.77□□□□□ -1.97
NPHP1O15259 RNU6-991P-201ENST00000516168 107 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 Y_RNA.676-201ENST00000516393 96 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 SNORA31.25-201ENST00000517242 134 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 AC087854.1-201ENST00000519706 414 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 AC022616.8-201ENST00000533569 253 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.77□□□□□ -1.97
NPHP1O15259 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.77□□□□□ -1.97
NPHP1O15259 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.77□□□□□ -1.97
NPHP1O15259 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.77□□□□□ -1.97
NPHP1O15259 MIR5692C1-201ENST00000585309 91 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 RNU6-89P-201ENST00000606519 100 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 AC064807.4-201ENST00000607201 407 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 AL121757.2-201ENST00000611223 313 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 SNORD98-201ENST00000636377 67 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 OR4G1P-203ENST00000641984 1631 ntBASIC2.77□□□□□ -1.97
NPHP1O15259 AC121333.1-201ENST00000567488 2709 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 RNU6-522P-201ENST00000364497 107 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 AL590002.1-201ENST00000406554 418 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 RN7SKP61-201ENST00000410642 295 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 CR769767.1-201ENST00000436337 346 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 AL603825.1-201ENST00000438481 80 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.76□□□□□ -1.97
NPHP1O15259 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.76□□□□□ -1.97
NPHP1O15259 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.76□□□□□ -1.97
NPHP1O15259 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.76□□□□□ -1.97
NPHP1O15259 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.76□□□□□ -1.97
NPHP1O15259 SNORA19.2-201ENST00000516013 114 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 RNU6-323P-201ENST00000521915 107 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 AL157687.1-201ENST00000554853 619 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 MIR5694-201ENST00000581190 76 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 AP001836.1-201ENST00000604675 523 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 AL357078.3-201ENST00000607528 618 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 AC063943.3-201ENST00000615562 356 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 AL132822.1-201ENST00000617063 513 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 FER-210ENST00000628534 558 ntTSL 5 BASIC2.76□□□□□ -1.97
NPHP1O15259 MIR1321-201ENST00000637766 79 ntBASIC2.76□□□□□ -1.97
NPHP1O15259 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
NPHP1O15259 MIR181A1-201ENST00000385026 110 ntBASIC2.75□□□□□ -1.97
NPHP1O15259 AL023284.1-201ENST00000403956 276 ntBASIC2.75□□□□□ -1.97
NPHP1O15259 Y_RNA.597-201ENST00000410463 100 ntBASIC2.75□□□□□ -1.97
NPHP1O15259 ERLEC1P1-201ENST00000433806 578 ntBASIC2.75□□□□□ -1.97
NPHP1O15259 IFNA20P-201ENST00000436840 528 ntBASIC2.75□□□□□ -1.97
NPHP1O15259 HMGN2P23-201ENST00000456759 269 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms