Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.18□□□□□ -2.44
CHKB-CPT1BH3BT56 SNORD114-9-201ENST00000364370 72 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 RNA5SP126-201ENST00000365092 109 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 RNU6-72P-201ENST00000384285 79 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 RNU6-817P-201ENST00000391083 104 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 SNORA12-201ENST00000391162 147 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 AL034345.1-201ENST00000407768 123 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 RNU6-177P-201ENST00000411257 104 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 DPRXP1-201ENST00000426312 460 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 TPRKBP1-201ENST00000456243 481 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 AC022364.2-201ENST00000457963 554 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 RPS29P1-201ENST00000465274 159 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 MTND1P22-201ENST00000510572 951 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 SNORA76.2-201ENST00000517095 137 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 AP003355.1-201ENST00000518956 587 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 SNORA4-201ENST00000584302 138 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 SNRPGP20-201ENST00000604477 205 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 AC018889.1-201ENST00000605372 397 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 AC097065.2-201ENST00000608159 533 ntBASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
CHKB-CPT1BH3BT56 MIR96-201ENST00000362288 78 ntBASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 RNU1-93P-201ENST00000364704 169 ntBASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 RNU6-438P-201ENST00000365561 103 ntBASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 AL355796.1-201ENST00000406706 323 ntBASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 AL591704.1-201ENST00000432574 275 ntBASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 RPL23AP50-201ENST00000434149 455 ntBASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 AP000797.1-201ENST00000478870 387 ntBASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 AC093534.1-201ENST00000504977 132 ntBASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 AC121161.1-201ENST00000510606 652 ntBASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 ZNF971P-201ENST00000562068 1249 ntBASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 MTATP6P3-201ENST00000581686 676 ntBASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 AL929325.1-201ENST00000603096 117 ntBASIC-0.2□□□□□ -2.44
CHKB-CPT1BH3BT56 RNU4-67P-201ENST00000364569 141 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 SNORA72.2-201ENST00000365028 127 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 MIR653-201ENST00000385279 96 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 RNA5SP511-201ENST00000410487 115 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 BX664727.1-201ENST00000416024 466 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 AC060773.1-201ENST00000421698 310 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 AL365338.1-201ENST00000422282 858 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 AC000111.3-201ENST00000433478 193 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 MTND2P20-201ENST00000440805 661 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 AC007000.2-201ENST00000442564 487 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 AC010531.2-201ENST00000465012 153 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 AC021146.8-201ENST00000507455 733 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 RNA5SP227-201ENST00000516184 113 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 RNU6-947P-201ENST00000516264 106 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 SNORA62.5-201ENST00000516634 120 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 AL357312.1-201ENST00000603879 298 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 AL157786.1-207ENST00000627771 695 ntBASIC-0.21□□□□□ -2.44
CHKB-CPT1BH3BT56 AL589743.1-201ENST00000551932 2712 ntBASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 RNU4-15P-201ENST00000362613 141 ntBASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 FCF1P10-201ENST00000407590 479 ntBASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 RPL31P35-201ENST00000431058 377 ntBASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 Z73417.1-201ENST00000447373 778 ntBASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 ART2BP-201ENST00000453501 499 ntBASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 AL122001.1-201ENST00000457027 370 ntBASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 AC016925.1-201ENST00000458303 298 ntBASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 snoU13.23-201ENST00000458863 104 ntBASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 AK3P2-201ENST00000507976 429 ntBASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 RNU6-856P-201ENST00000516959 98 ntBASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 AL157871.3-201ENST00000557231 293 ntBASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 AC015712.3-201ENST00000559380 164 ntBASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.22□□□□□ -2.44
CHKB-CPT1BH3BT56 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 SNORA32.1-201ENST00000364514 115 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 SNORA75B-201ENST00000384053 137 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 RNU6-793P-201ENST00000384233 104 ntBASIC-0.23□□□□□ -2.45
CHKB-CPT1BH3BT56 MIR764-201ENST00000390811 85 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms