Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC099654.9-201ENST00000637055 678 ntBASIC-0.23□□□□□ -2.45
CPSF4LA6NMK7 SNORD114-5-201ENST00000362928 70 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 RNU6-288P-201ENST00000363690 104 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 MIR520F-201ENST00000384824 87 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 RNU6-754P-201ENST00000391166 107 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 RNA5SP63-201ENST00000391225 112 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 AL590084.2-201ENST00000401481 382 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 TPMTP2-201ENST00000414372 726 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 BX664727.1-201ENST00000416024 466 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 ARL5AP1-201ENST00000418991 388 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 AL358176.2-201ENST00000425769 204 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 LARP1BP3-201ENST00000437229 869 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 RNU7-34P-201ENST00000459394 64 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 RNU6-390P-201ENST00000516259 103 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 MTND4LP26-201ENST00000518144 282 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 CR383656.8-201ENST00000549046 145 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 AC243773.3-201ENST00000613270 256 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 AC104985.3-201ENST00000623479 597 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 AC073544.1-201ENST00000600110 1595 ntBASIC-0.24□□□□□ -2.45
CPSF4LA6NMK7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 MIR330-201ENST00000362196 94 ntBASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 RNU6-952P-201ENST00000391164 108 ntBASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 RNA5SP496-201ENST00000391240 109 ntBASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 C1DP2-201ENST00000418167 426 ntBASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 AL139421.1-201ENST00000423010 169 ntBASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 C1DP4-201ENST00000455429 424 ntBASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 AC013828.1-201ENST00000481845 158 ntBASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 RPF2P2-201ENST00000504693 896 ntBASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 AC022523.2-201ENST00000561045 150 ntBASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 AC023824.3-201ENST00000569003 562 ntBASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 AC090615.1-201ENST00000577519 154 ntBASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 AC097065.2-201ENST00000608159 533 ntBASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 MIR3529-201ENST00000637713 78 ntBASIC-0.25□□□□□ -2.45
CPSF4LA6NMK7 DBF4P1-201ENST00000412976 1892 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 SNORD32B-201ENST00000364460 84 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 MTCO1P21-201ENST00000416634 589 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AC073261.1-201ENST00000429409 121 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 RPL23AP50-201ENST00000434149 455 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 COX7BP2-201ENST00000437976 242 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 MTCO3P45-201ENST00000443036 613 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AC003071.1-201ENST00000451219 789 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 snoU13.25-201ENST00000458945 104 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 MTCO3P28-201ENST00000513351 515 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AC110760.3-202ENST00000515177 371 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 MIR449C-201ENST00000516047 92 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 RNU6-572P-201ENST00000516724 80 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AC007834.2-201ENST00000536310 343 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 TPRKBP2-201ENST00000565969 475 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 MIR3678-201ENST00000578455 94 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AC115989.2-201ENST00000578640 563 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AF038458.1-201ENST00000588406 262 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AC104408.1-201ENST00000605241 170 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AL390208.1-201ENST00000605885 644 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AL356094.1-201ENST00000624663 1212 ntBASIC-0.26□□□□□ -2.45
CPSF4LA6NMK7 AL390237.1-201ENST00000404226 1415 ntBASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 RNU6-673P-201ENST00000365084 104 ntBASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 RN7SKP266-201ENST00000410232 287 ntBASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 MTCO2P1-201ENST00000424648 477 ntBASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 AL606517.1-201ENST00000446914 387 ntBASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 AP000797.1-201ENST00000478870 387 ntBASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 LRRC34P2-201ENST00000514850 553 ntBASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 AC011712.1-201ENST00000588959 234 ntBASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 AL159153.1-201ENST00000619688 317 ntBASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC-0.27□□□□□ -2.45
CPSF4LA6NMK7 RNU6-858P-201ENST00000362436 107 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms