Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 Y_RNA.151-201ENST00000363566 112 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 RNU2-63P-201ENST00000410792 194 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 RPL32P28-201ENST00000443577 397 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 AC096745.1-201ENST00000509945 370 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 AF213884.2-201ENST00000510417 903 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 RNU5F-2P-201ENST00000516066 82 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 AC026464.5-201ENST00000562497 722 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 AC018638.8-201ENST00000588755 281 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 AC023043.2-201ENST00000589678 1026 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 MIR3976-201ENST00000606807 139 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 AL138726.1-201ENST00000614873 333 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 AL449363.1-201ENST00000617815 186 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 AL159153.1-201ENST00000619688 317 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 U4.3-201ENST00000621047 82 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 AC005858.4-201ENST00000623191 700 ntBASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
NKX6-3A6NJ46 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 RNU6-562P-201ENST00000362731 107 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 Y_RNA.160-201ENST00000363677 92 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 Y_RNA.212-201ENST00000364177 102 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 SNORD32A-201ENST00000364805 84 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 SNORA36A-201ENST00000384221 132 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 RNU6-933P-201ENST00000384424 107 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 RNU6-790P-201ENST00000384479 105 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 RNU6-1274P-201ENST00000384557 107 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 RNU6-306P-201ENST00000384617 107 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 RNU6-95P-201ENST00000384697 107 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 MIR27B-201ENST00000385129 97 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AL591034.2-201ENST00000402839 359 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 SNORA11.2-201ENST00000408318 127 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AL030996.1-201ENST00000411430 235 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AL590135.1-201ENST00000422215 156 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AC019205.3-201ENST00000424573 156 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 UBE2V1P4-201ENST00000425374 344 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 USP9YP28-201ENST00000435142 589 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 RPS12P2-201ENST00000439728 269 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 MTND4LP16-201ENST00000440828 295 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AC016700.2-201ENST00000446011 156 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 RPS3P1-201ENST00000456781 192 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 RPL30P1-201ENST00000488676 339 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AC015911.1-201ENST00000495111 156 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 RN7SKP24-201ENST00000515888 284 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 SNORA31.16-201ENST00000516773 139 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 RNU6-1088P-201ENST00000516850 104 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 RN7SKP256-201ENST00000517201 314 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 RNU6-586P-201ENST00000517265 104 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AC109329.1-201ENST00000518744 317 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 SCOCP1-201ENST00000554676 349 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 MIR6817-201ENST00000615588 66 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 SNORD98-201ENST00000636377 67 ntBASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.1□□□□□ -2.07
NKX6-3A6NJ46 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 MIR449A-201ENST00000362113 91 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 RNU1-23P-201ENST00000363361 144 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 SNORD114-30-201ENST00000364448 72 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 RNU6-128P-201ENST00000383976 107 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 BTF3L4P2-201ENST00000392798 346 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AL139413.1-201ENST00000421309 217 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AC244670.1-201ENST00000436879 112 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AL161788.1-201ENST00000441805 169 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 PPP1R2P5-201ENST00000457256 603 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 U8.21-201ENST00000459536 136 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 MTCO1P29-201ENST00000496868 288 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AC008526.1-201ENST00000509149 338 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 RNA5SP24-201ENST00000516478 95 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AP000889.2-201ENST00000532684 490 ntBASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.09□□□□□ -2.07
NKX6-3A6NJ46 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms