Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 Y_RNA.255-201ENST00000364581 97 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 RNU6-116P-201ENST00000384042 109 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 RNU6-550P-201ENST00000391057 101 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 SNORA26.3-201ENST00000391119 136 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 RN7SKP61-201ENST00000410642 295 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 RNU6-293P-201ENST00000411259 106 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 AL358453.1-201ENST00000422522 250 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 AC078809.1-201ENST00000427601 140 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 AL354695.1-201ENST00000427935 228 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 FTH1P12-201ENST00000432137 551 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 AC244670.1-201ENST00000436879 112 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 AC013470.1-201ENST00000453438 462 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 SNORD11.1-201ENST00000459482 85 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 RPL9P9-202ENST00000466501 579 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 ATP5EP1-201ENST00000510257 156 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 AC090572.1-201ENST00000519251 160 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 AC012414.6-201ENST00000568241 401 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 AC012507.3-201ENST00000603556 477 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 AL356157.2-201ENST00000605122 111 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 AL121890.5-201ENST00000620848 304 ntBASIC1.07□□□□□ -2.24
RBFOX3A6NFN3 ICE2P2-201ENST00000483823 2787 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNA5SP432-201ENST00000362480 116 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-37P-201ENST00000362692 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 U3.4-201ENST00000363352 213 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-11P-201ENST00000364234 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU4-56P-201ENST00000364700 142 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-336P-201ENST00000364891 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 SNORD1A-201ENST00000364968 72 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-25P-201ENST00000383873 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-1-201ENST00000383898 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 SNORA32.2-201ENST00000384049 122 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-48P-201ENST00000384161 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-36P-201ENST00000384172 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-4P-201ENST00000384205 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-5P-201ENST00000384238 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-3P-201ENST00000384314 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-16P-201ENST00000384385 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-15P-201ENST00000384534 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-2-201ENST00000384627 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-29P-201ENST00000384637 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-9-201ENST00000384776 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-33P-201ENST00000384793 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 MIR520A-201ENST00000384862 85 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNA5SP213-201ENST00000391031 106 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 SNORA67.5-201ENST00000391036 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 SNORA67.6-201ENST00000391093 99 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 AL590135.1-201ENST00000422215 156 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 AC019205.3-201ENST00000424573 156 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RPS27P16-201ENST00000425758 201 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 AC010975.2-201ENST00000427781 588 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 AC016700.2-201ENST00000446011 156 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 Z73417.1-201ENST00000447373 778 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 AC079448.1-201ENST00000449377 373 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 AC015911.1-201ENST00000495111 156 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 AC108078.1-201ENST00000508073 725 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 SNORA31.16-201ENST00000516773 139 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 AP003072.2-201ENST00000527756 676 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 AL590229.1-201ENST00000603497 542 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 AC069114.2-201ENST00000604699 304 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 RNU6-6P-201ENST00000606623 107 ntBASIC1.06□□□□□ -2.24
RBFOX3A6NFN3 SNORD33-201ENST00000362761 85 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 RNU4-28P-201ENST00000364739 141 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 SNORD32A-201ENST00000364805 84 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 Y_RNA.367-201ENST00000365544 101 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 RNU6-203P-201ENST00000384038 104 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 RNU6-692P-201ENST00000384496 107 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 EBAG9P1-201ENST00000418955 543 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 HSFY7P-201ENST00000432672 318 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 AC104850.1-201ENST00000435940 476 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 HSFY8P-201ENST00000437934 318 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 GTF2IP13-201ENST00000438487 386 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 HSPE1P9-201ENST00000440046 311 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 AC027119.1-201ENST00000440877 241 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 SNRPEP8-201ENST00000442866 260 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 EPS15P1-201ENST00000448836 336 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 HSFY5P-201ENST00000453726 309 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 RPL31P3-201ENST00000458430 332 ntBASIC1.05□□□□□ -2.24
RBFOX3A6NFN3 RPL36AP21-201ENST00000490372 323 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms