Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 AL365338.1-201ENST00000422282 858 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 MTCO3P18-201ENST00000440206 761 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 MTND1P16-201ENST00000465177 898 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 MTCO3P7-201ENST00000510008 774 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 MTND1P36-201ENST00000522384 936 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 AL157871.3-201ENST00000557231 293 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 MIR3976-201ENST00000606807 139 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-87P-201ENST00000607561 108 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 AL355816.2-201ENST00000610049 647 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 AC104465.1-201ENST00000611365 139 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 AC007792.1-201ENST00000623023 402 ntBASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV17A0A0B4J275 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-222P-201ENST00000362438 107 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 Y_RNA.85-201ENST00000363014 111 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 RNU5B-1-201ENST00000363286 116 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-701P-201ENST00000384059 107 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-910P-201ENST00000390844 107 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 AC013262.1-201ENST00000426710 252 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 AL158053.1-201ENST00000441503 453 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 AC012308.1-201ENST00000451232 178 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 RPL39P38-201ENST00000467018 153 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 AC005741.1-201ENST00000511094 432 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 AC024589.1-201ENST00000512207 263 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 SNORD79.1-201ENST00000516069 84 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 RNA5SP255-201ENST00000516370 107 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 MTCO3P15-201ENST00000526563 574 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 DEFB131D-201ENST00000526803 184 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 AC092451.2-201ENST00000538746 658 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 AL353765.1-201ENST00000605514 183 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 MIR8084-201ENST00000614105 89 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 MTND5P42-201ENST00000637720 498 ntBASIC0.3□□□□□ -2.36
TRAV17A0A0B4J275 Y_RNA.33-201ENST00000362591 102 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-862P-201ENST00000362804 105 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 SNORD116-20-201ENST00000384529 92 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 RNU2-70P-201ENST00000410718 179 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 MTCO1P21-201ENST00000416634 589 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 MTND4P25-201ENST00000441039 533 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 SNORA31.2-201ENST00000516019 134 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 SNORA31.4-201ENST00000516049 129 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 AC021451.1-201ENST00000523498 1129 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 AC104072.1-201ENST00000568817 668 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 HMGN1P30-201ENST00000589286 268 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 AC098483.2-201ENST00000603158 454 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 OR4H6P-202ENST00000603819 340 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 AL136363.2-201ENST00000604173 851 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 AC069545.1-201ENST00000605671 358 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 AC090186.1-201ENST00000605991 572 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 AL109933.3-201ENST00000619095 188 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 AC112204.3-201ENST00000623822 332 ntBASIC0.29□□□□□ -2.36
TRAV17A0A0B4J275 Y_RNA.363-201ENST00000365529 113 ntBASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-969P-201ENST00000383900 105 ntBASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 FCF1P10-201ENST00000407590 479 ntBASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 RNA5SP127-201ENST00000411051 133 ntBASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 AC244023.1-201ENST00000426884 112 ntBASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 USP9YP14-201ENST00000430663 563 ntBASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-914P-201ENST00000516749 109 ntBASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 MIR4742-201ENST00000581069 85 ntBASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 AC242498.1-201ENST00000604134 111 ntBASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 AC243994.1-201ENST00000618627 109 ntBASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 AC231657.1-201ENST00000624313 397 ntBASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 AC106858.1-201ENST00000637497 429 ntBASIC0.28□□□□□ -2.36
TRAV17A0A0B4J275 RNU6-1123P-201ENST00000362347 106 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 AF228730.1-201ENST00000397972 663 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 MIR1197-201ENST00000408818 88 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 Y_RNA.623-201ENST00000411128 95 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 BTF3L4P1-201ENST00000413813 468 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms