Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 RAP1BP3-201ENST00000407180 549 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 RNU4-22P-201ENST00000411058 166 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 SNX2P2-201ENST00000424553 323 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 AL353777.1-201ENST00000425552 326 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 AC116353.3-201ENST00000511215 249 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 AC010587.2-201ENST00000511727 448 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 RNU6-1223P-201ENST00000517124 104 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 CYCSP23-201ENST00000519781 313 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 AC136932.1-201ENST00000574771 208 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 AL139022.2-201ENST00000606934 443 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 AC106800.4-201ENST00000614905 153 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 MIR6788-201ENST00000618842 66 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 AC099786.3-201ENST00000565735 1410 ntBASIC0.61□□□□□ -2.31
TRAV3A0A0B4J244 RNU6-78P-201ENST00000362897 107 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 RNU6-371P-201ENST00000364283 108 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 RNU6-142P-201ENST00000384019 107 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 MIR578-201ENST00000384828 96 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 AL117342.1-201ENST00000404861 406 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 MTCYBP2-201ENST00000407745 171 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 AC019070.1-201ENST00000415008 1024 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 MTND5P2-201ENST00000442927 1142 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 AL360271.2-201ENST00000447710 161 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 MTND1P18-201ENST00000448191 573 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 MTND1P12-201ENST00000455231 147 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 RNU5A-4P-201ENST00000516588 111 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 HMGB1P33-201ENST00000563485 527 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 MIR4661-201ENST00000582720 75 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 MIR3136-201ENST00000583498 78 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 SNORA4-201ENST00000584302 138 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 MIR4653-201ENST00000585107 83 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 AC016727.2-201ENST00000603988 621 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 AC090578.1-201ENST00000604955 591 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 AL022345.2-201ENST00000606307 135 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 BX284668.6-201ENST00000606899 438 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 MIR6866-201ENST00000638146 69 ntBASIC0.6□□□□□ -2.31
TRAV3A0A0B4J244 MIR96-201ENST00000362288 78 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 Y_RNA.355-201ENST00000365462 98 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 MIR520E-201ENST00000384867 87 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 MIR515-2-201ENST00000384883 83 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 MIR515-1-201ENST00000384884 83 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AL136310.1-201ENST00000404926 654 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 HMGN1P14-201ENST00000412459 517 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AC006461.1-201ENST00000412637 326 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 HSPE1P13-201ENST00000451143 297 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 RPS29P1-201ENST00000465274 159 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AC145146.1-201ENST00000496370 254 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AC034244.1-201ENST00000507687 207 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 MIR449C-201ENST00000516047 92 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AC107934.1-201ENST00000522215 217 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 DEFB108E-201ENST00000524692 240 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AC008752.3-201ENST00000588113 712 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AL391646.1-201ENST00000603860 190 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AL034555.1-201ENST00000604816 211 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AP002360.4-201ENST00000606980 481 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AC108706.1-201ENST00000611053 297 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AC083806.3-201ENST00000614016 455 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 AL356596.1-201ENST00000624230 379 ntBASIC0.59□□□□□ -2.31
TRAV3A0A0B4J244 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
TRAV3A0A0B4J244 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 SNORD116.1-201ENST00000365628 92 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 Y_RNA.465-201ENST00000384293 102 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 SNORD116-12-201ENST00000384468 92 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 SNORA12.2-201ENST00000391040 156 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 SNORA12-201ENST00000391162 147 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 RNA5SP201-201ENST00000410316 124 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 MTATP6P20-201ENST00000414147 562 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 MTCO3P41-201ENST00000414801 328 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 ARL5AP1-201ENST00000418991 388 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 AC069257.2-201ENST00000441819 155 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 AL358794.1-201ENST00000445689 381 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 ATP5J2P3-201ENST00000451550 258 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 ART2BP-201ENST00000453501 499 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 AC016925.1-201ENST00000458303 298 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 snoU13.27-201ENST00000459278 104 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 RNU1-86P-201ENST00000516108 154 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 ACA64.5-201ENST00000516207 127 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 RNU1-107P-201ENST00000516617 154 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 MTND2P7-201ENST00000521337 640 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 AC011979.2-201ENST00000527568 352 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 AC013828.2-201ENST00000532487 235 ntBASIC0.58□□□□□ -2.32
TRAV3A0A0B4J244 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms