Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 AL590240.1-201ENST00000334118 313 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 SNORA73.1-201ENST00000363107 205 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 RNY1P1-201ENST00000364372 112 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 RNU6-242P-201ENST00000384359 107 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 Y_RNA.486-201ENST00000384398 107 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 RNA5SP146-201ENST00000410743 123 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 AL354714.3-201ENST00000447284 493 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 AC107626.1-201ENST00000471084 183 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 RN7SL814P-201ENST00000487715 300 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 RNA5SP20-201ENST00000515976 84 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 MIR4697-201ENST00000582977 78 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 IGLL4P-201ENST00000614590 133 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 SNX18P1Y-201ENST00000616231 511 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 MIR6839-201ENST00000620425 113 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 MIR3199-2-201ENST00000636243 86 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 AL592437.2-201ENST00000421655 2434 ntBASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA4Q9Y5G9 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 SNORA63D-201ENST00000364359 132 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 MIR589-201ENST00000385238 99 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 MIR3065-201ENST00000390137 79 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 MIR759-201ENST00000390224 91 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 RPL23AP48-201ENST00000406913 488 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 RNA5SP511-201ENST00000410487 115 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 RPS3P1-201ENST00000456781 192 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 RNU6-504P-201ENST00000516568 104 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 RPL17P51-201ENST00000605218 238 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 RN7SL722P-201ENST00000617780 284 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 RN7SL565P-201ENST00000618246 284 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 AC091905.4-201ENST00000623432 202 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 MIR6715B-201ENST00000637172 77 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 AC058791.1-201ENST00000608412 3198 ntBASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA4Q9Y5G9 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 AL672296.1-201ENST00000427780 2158 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 MAPK10-303ENST00000641324 3959 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 RNU6-1010P-201ENST00000362757 107 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 SNORA51.4-201ENST00000364993 124 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 SNORA1-201ENST00000384107 130 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 MIR181A2-201ENST00000384863 110 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 AL139095.1-201ENST00000404326 391 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 AL117342.1-201ENST00000404861 406 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 AL161651.1-201ENST00000440882 223 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 AC080013.2-201ENST00000460866 323 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 HMGN2P9-201ENST00000476875 229 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 RNA5SP367-201ENST00000516557 118 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 AC074050.1-201ENST00000563247 211 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 RPS15AP11-201ENST00000594193 385 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 Six3os1_7.1-201ENST00000621512 201 ntBASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA4Q9Y5G9 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 RNA5SP90-201ENST00000364801 99 ntBASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 RNU6-1276P-201ENST00000365372 104 ntBASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 RNA5SP87-201ENST00000384155 118 ntBASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 MIR562-201ENST00000384894 95 ntBASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 MIR192-201ENST00000384915 110 ntBASIC5□□□□□ -1.61
PCDHGA4Q9Y5G9 RNU6-279P-201ENST00000391297 101 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms