Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC004805.2-201ENST00000605382 482 ntBASIC3.66□□□□□ -1.82
CTDP1Q9Y5B0 AC090617.7-201ENST00000623952 126 ntBASIC3.66□□□□□ -1.82
CTDP1Q9Y5B0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.66□□□□□ -1.82
CTDP1Q9Y5B0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTDP1Q9Y5B0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.66□□□□□ -1.82
CTDP1Q9Y5B0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CTDP1Q9Y5B0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTDP1Q9Y5B0 SNORA71.1-201ENST00000364523 117 ntBASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 Y_RNA.526-201ENST00000384572 110 ntBASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 USP9YP16-201ENST00000430287 407 ntBASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 USP9YP23-201ENST00000455085 407 ntBASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 AL049873.1-201ENST00000480540 376 ntBASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 Y_RNA.668-201ENST00000516233 93 ntBASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 RNY3P15-201ENST00000516297 97 ntBASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 AC062037.2-201ENST00000610137 73 ntBASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 AC107871.2-201ENST00000612894 502 ntBASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 AC091903.1-201ENST00000624322 454 ntBASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 AC007785.2-201ENST00000598627 1916 ntBASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTDP1Q9Y5B0 AC000403.1-201ENST00000613696 3585 ntBASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 RNU6-874P-201ENST00000362390 105 ntBASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 RNA5SP293-201ENST00000410527 113 ntBASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 MTND3P9-201ENST00000429526 346 ntBASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 Z82210.1-201ENST00000440037 231 ntBASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 RPL23AP58-201ENST00000440453 469 ntBASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 AC073910.1-201ENST00000445047 438 ntBASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 RPS4XP22-201ENST00000480755 780 ntBASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 AC008885.1-201ENST00000514930 301 ntBASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 RNU6-612P-201ENST00000516909 102 ntBASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 MIR5696-201ENST00000578474 85 ntBASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 MTND4LP5-201ENST00000605152 292 ntBASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 MIR8062-201ENST00000621515 85 ntBASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CTDP1Q9Y5B0 MTND5P7-201ENST00000413558 1798 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 RNU6-595P-201ENST00000363944 107 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 Y_RNA.307-201ENST00000365022 117 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 RNU6-805P-201ENST00000365643 106 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 Y_RNA.396-201ENST00000383949 103 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 SNORA7.4-201ENST00000384249 137 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 SNORA51.11-201ENST00000384442 131 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 Y_RNA.551-201ENST00000384661 102 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 MIR628-201ENST00000385229 95 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 RPL21P1-201ENST00000399532 476 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 RNA5SP229-201ENST00000410809 99 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 HMGN2P30-201ENST00000423237 256 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 AC098614.2-201ENST00000426040 255 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 SNRPEP9-201ENST00000436794 238 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 AC104564.1-201ENST00000493028 407 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 RNU6-377P-201ENST00000515965 102 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 MIR2276-201ENST00000516886 89 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 MIR5701-3-201ENST00000578890 82 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 MIR5701-1-201ENST00000585138 82 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 AC136601.2-201ENST00000604356 474 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 MIR5701-2-201ENST00000615634 82 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 AL137790.1-201ENST00000634283 177 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 U6.99-201ENST00000637524 83 ntBASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTDP1Q9Y5B0 AC138915.1-201ENST00000565427 1685 ntBASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 RNU6-428P-201ENST00000362942 107 ntBASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 RNU6-379P-201ENST00000363813 104 ntBASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 RNU4-50P-201ENST00000364361 141 ntBASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 RNU5E-7P-201ENST00000365290 117 ntBASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 SNORA69.1-201ENST00000390904 137 ntBASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 RN7SKP58-201ENST00000411010 305 ntBASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 MTCO3P19-201ENST00000415864 321 ntBASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 AC013470.1-201ENST00000453438 462 ntBASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 snoU109.2-201ENST00000459316 135 ntBASIC3.62□□□□□ -1.83
CTDP1Q9Y5B0 AP000867.2-201ENST00000532468 320 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms