Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 Y_RNA.302-201ENST00000364997 102 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 RNU5E-7P-201ENST00000365290 117 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 MIR548B-201ENST00000385247 97 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 RNU6-1242P-201ENST00000391052 103 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 EBAG9P1-201ENST00000418955 543 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 CST2P1-201ENST00000425770 87 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 AL591043.1-201ENST00000432461 424 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 AC245047.4-201ENST00000433189 144 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 MTCYBP39-201ENST00000437562 491 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 ART2BP-201ENST00000453501 499 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 Y_RNA.638-201ENST00000459374 113 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 TOMM22P6-201ENST00000465035 409 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 COX6CP14-201ENST00000469580 174 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 AL133373.1-201ENST00000497098 94 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 MTND3P5-201ENST00000512798 333 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 HMGB1P33-201ENST00000563485 527 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 BNIP3P31-201ENST00000604515 566 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 AC080078.3-201ENST00000605407 463 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 AC104073.3-201ENST00000610942 955 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.91□□□□□ -2.26
HDGFL3Q9Y3E1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
HDGFL3Q9Y3E1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.9□□□□□ -2.26
HDGFL3Q9Y3E1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 RNU1-22P-201ENST00000363334 158 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-142P-201ENST00000384019 107 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 SNORD115.1-201ENST00000391109 76 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 RPL23AP32-201ENST00000395315 459 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 MRPL35P1-201ENST00000404272 572 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 MTCO2P21-201ENST00000419780 677 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 AC099677.2-201ENST00000436385 175 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 RNA5SP269-201ENST00000459032 137 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 AL049829.1-201ENST00000465411 156 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 SNORD60.2-201ENST00000516883 86 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 AC019176.1-201ENST00000518519 225 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 SUMO2P18-201ENST00000518873 252 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 AP002453.2-201ENST00000533503 320 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 AC090115.3-201ENST00000553218 849 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 ZNF519P3-201ENST00000557158 1032 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 MIR3937-201ENST00000580135 106 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 AC090578.1-201ENST00000604955 591 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 U4.7-201ENST00000638126 106 ntBASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
HDGFL3Q9Y3E1 MTND5P35-201ENST00000557537 1720 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 AC010615.1-201ENST00000594254 1764 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 MIR337-201ENST00000362281 93 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 RNU4-1-201ENST00000363925 141 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-157P-201ENST00000383957 107 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 SNORA24.1-201ENST00000384401 135 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 MTCO3P41-201ENST00000414801 328 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 RPL21P90-201ENST00000415692 466 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 RPL22P17-201ENST00000438729 315 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 AL031313.1-201ENST00000448435 256 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 USP9YP25-201ENST00000457708 443 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 HMGN1P7-201ENST00000491722 313 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 HSPE1P23-201ENST00000509838 286 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 ATP5EP1-201ENST00000510257 156 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 CYP3A52P-201ENST00000563326 91 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 AC008521.1-201ENST00000587471 187 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 AC008752.3-201ENST00000588113 712 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 AC069114.2-201ENST00000604699 304 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 AL157786.1-207ENST00000627771 695 ntBASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.89□□□□□ -2.27
HDGFL3Q9Y3E1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-527P-201ENST00000363425 104 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 SNORA63D-201ENST00000364359 132 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 RNU6-39P-201ENST00000384344 107 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 MTCYBP2-201ENST00000407745 171 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 AC137499.1-201ENST00000427602 88 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 CALM2P2-201ENST00000428512 440 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 MTND1P20-201ENST00000430341 950 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 RPL37P21-201ENST00000435890 276 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 SNRPEP8-201ENST00000442866 260 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 AC244505.5-201ENST00000443639 207 ntBASIC0.88□□□□□ -2.27
HDGFL3Q9Y3E1 MTCO2P29-201ENST00000465212 189 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms