Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM35Q9UPQ4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 U3.8-201ENST00000363675 217 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 RNU1-132P-201ENST00000364300 164 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 Y_RNA.290-201ENST00000364879 114 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 RNU6-1240P-201ENST00000365155 104 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 RNA5SP390-201ENST00000410191 113 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 RPS26P47-201ENST00000427219 348 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 PHBP16-201ENST00000446318 950 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 SRIP1-201ENST00000489235 288 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 RPL36AP21-201ENST00000490372 323 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 RNA5SP464-201ENST00000516251 108 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 SNORA31.8-201ENST00000516327 108 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 MIR4666B-201ENST00000578142 81 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 MIR3923-201ENST00000579521 83 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 AC114781.5-201ENST00000615297 108 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 AL021997.2-201ENST00000615674 271 ntBASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM35Q9UPQ4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 RNU1-75P-201ENST00000347264 129 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 Y_RNA.124-201ENST00000363339 93 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 Y_RNA.313-201ENST00000365095 103 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 RPL23AP82-202ENST00000427528 469 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 RPL23AP7-203ENST00000449021 469 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 RNA5SP103-201ENST00000459503 118 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 CENPBD1P1-201ENST00000464061 469 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 AC108022.1-201ENST00000493466 478 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 AC005921.1-201ENST00000510589 286 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 RNU6-504P-201ENST00000516568 104 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 MED28P6-201ENST00000558776 231 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 MIR4284-201ENST00000578924 81 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 AC005972.2-201ENST00000604690 348 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 AL591034.3-201ENST00000605511 685 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 AC018692.3-201ENST00000623929 123 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 U2.21-201ENST00000637295 81 ntBASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM35Q9UPQ4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
TRIM35Q9UPQ4 AL159152.1-201ENST00000635019 2587 ntBASIC5.71□□□□□ -1.49
TRIM35Q9UPQ4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.71□□□□□ -1.49
TRIM35Q9UPQ4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
TRIM35Q9UPQ4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 RNU1-20P-201ENST00000363314 162 ntBASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 RNU6-140P-201ENST00000384566 108 ntBASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 AC099548.1-201ENST00000421443 426 ntBASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 AC012308.1-201ENST00000451232 178 ntBASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 AC015795.1-201ENST00000513669 327 ntBASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 AC074050.1-201ENST00000563247 211 ntBASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 ATP5J2P6-201ENST00000565203 266 ntBASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 AC009163.5-201ENST00000575421 637 ntBASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 AC090897.2-201ENST00000581715 130 ntBASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 AC007229.1-201ENST00000590455 412 ntBASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 AL020997.2-201ENST00000602607 184 ntBASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 uc_338.4-201ENST00000616635 176 ntBASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM35Q9UPQ4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 RNU6-414P-201ENST00000363705 104 ntBASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 SNORA4.2-201ENST00000365313 147 ntBASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 EI24P2-201ENST00000397776 1076 ntBASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 RN7SL132P-201ENST00000478131 296 ntBASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 RN7SL817P-201ENST00000480777 288 ntBASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 AC091979.2-201ENST00000607514 214 ntBASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 AC093732.2-201ENST00000607950 274 ntBASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM35Q9UPQ4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 RNU6-778P-201ENST00000363269 103 ntBASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 Y_RNA.213-201ENST00000364178 111 ntBASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 RNU6-979P-201ENST00000383896 107 ntBASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 RNU1-44P-201ENST00000384453 163 ntBASIC5.69□□□□□ -1.5
TRIM35Q9UPQ4 MIR873-201ENST00000401120 77 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms