Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 MAPK10-266ENST00000641066 6555 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 MTND5P30-201ENST00000452896 1731 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 MTND5P16-201ENST00000460269 1703 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 AC099654.7-201ENST00000635788 2127 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 RNU6-72P-201ENST00000384285 79 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 RNA5SP21-201ENST00000410917 96 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 AC018865.2-201ENST00000423631 129 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 BX276092.3-201ENST00000424182 230 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 AL645568.3-201ENST00000433683 316 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 HIGD1AP2-201ENST00000446367 280 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 snoU13.26-201ENST00000459452 105 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 SNORA64.4-201ENST00000516632 81 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 RNU6-1137P-201ENST00000517073 99 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 AC109479.2-201ENST00000517842 174 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 AP004607.1-201ENST00000524456 203 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 RNU6-85P-201ENST00000605989 107 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 AC090617.7-201ENST00000623952 126 ntBASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SCAF8Q9UPN6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 Y_RNA.144-201ENST00000363521 113 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 RNU6-1329P-201ENST00000365664 107 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 MIR9-1-201ENST00000385198 89 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 RNU6-750P-201ENST00000390946 107 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 SNORA75.6-201ENST00000391318 127 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 RNA5SP344-201ENST00000411081 104 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 AC023141.4-201ENST00000412031 328 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 UBE2V1P4-201ENST00000425374 344 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 AC093151.1-201ENST00000427711 313 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 USP9YP30-201ENST00000430729 455 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 SNORD5.1-201ENST00000458800 75 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 AC090525.1-201ENST00000479116 478 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 SRIP1-201ENST00000489235 288 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 AC021146.2-201ENST00000504736 556 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 Y_RNA.720-201ENST00000517166 92 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 AC109329.2-201ENST00000519658 482 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 AC006199.1-201ENST00000548728 219 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 ELOCP5-201ENST00000604924 333 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 AC011890.2-201ENST00000613393 294 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 AC083806.3-201ENST00000614016 455 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 AC091925.1-201ENST00000623204 462 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 Z69720.2-201ENST00000624755 279 ntBASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.24□□□□□ -1.89
SCAF8Q9UPN6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 RNA5SP383-201ENST00000362934 120 ntBASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 RNU6-1280P-201ENST00000365211 107 ntBASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 U8.9-201ENST00000365667 134 ntBASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 Y_RNA.463-201ENST00000384271 102 ntBASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 MIR767-201ENST00000390228 109 ntBASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 SNORA26.7-201ENST00000391288 122 ntBASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 MCFD2P1-201ENST00000417812 300 ntBASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 MTND5P22-201ENST00000458380 195 ntBASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 RNU7-187P-201ENST00000458985 68 ntBASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 AC146507.2-201ENST00000460608 476 ntBASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 AC011494.1-201ENST00000596454 237 ntBASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCAF8Q9UPN6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 RNU1-35P-201ENST00000362782 153 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 Y_RNA.133-201ENST00000363428 110 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 RNU6-1059P-201ENST00000363752 98 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 Y_RNA.252-201ENST00000364556 101 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 AC117470.1-201ENST00000381974 330 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 RNU6-1105P-201ENST00000384774 107 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 SNORD73A-201ENST00000386062 65 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 RNU6-293P-201ENST00000411259 106 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 AC003685.2-201ENST00000422795 395 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 AL160004.2-201ENST00000432935 350 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 AC112220.1-201ENST00000434628 355 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 AL441985.1-201ENST00000457727 251 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 RNU6-237P-201ENST00000515985 71 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 AC104576.1-201ENST00000524225 88 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SCAF8Q9UPN6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms