Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RNU6-338P-201ENST00000383888 105 ntBASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 RPL21P1-201ENST00000399532 476 ntBASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 HMGN1P7-201ENST00000491722 313 ntBASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 AC116562.3-201ENST00000506136 177 ntBASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 MTCYBP40-201ENST00000509390 1135 ntBASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 AC068587.5-201ENST00000528506 175 ntBASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 AL161670.1-201ENST00000554348 137 ntBASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 AC098848.2-201ENST00000588023 330 ntBASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 AL078603.1-201ENST00000603824 313 ntBASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 AC093424.1-201ENST00000604999 338 ntBASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 MIR7974-201ENST00000615835 79 ntBASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 AL603839.4-201ENST00000624658 1005 ntBASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CTNNA3Q9UI47 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 CBX3P1-201ENST00000325243 554 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 RNU6-179P-201ENST00000363350 107 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 RNU6-553P-201ENST00000364047 96 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 SNORA20.2-201ENST00000383922 131 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 RNU6-1179P-201ENST00000384667 107 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AC068050.1-201ENST00000394891 380 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 RNU6-607P-201ENST00000411283 108 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AC011233.1-201ENST00000422812 283 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AL590556.1-201ENST00000423231 483 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AL365203.2-201ENST00000423444 196 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 MTND1P30-201ENST00000441241 901 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AC079781.2-201ENST00000446424 169 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AC112492.4-201ENST00000456549 352 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 RNU1-123P-201ENST00000458950 160 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AC104136.1-201ENST00000512969 394 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 Y_RNA.687-201ENST00000516558 91 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 Vault.3-201ENST00000516676 95 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 RNU6-232P-201ENST00000517144 64 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 BNIP3P6-201ENST00000549284 499 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 MIR4421-201ENST00000578133 69 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AC005771.1-201ENST00000585581 349 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AL136363.2-201ENST00000604173 851 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AL158032.1-201ENST00000605401 106 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AC122133.1-201ENST00000613964 233 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 AL157834.3-201ENST00000615543 103 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 uc_338.11-201ENST00000619132 160 ntBASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CTNNA3Q9UI47 ZNF680P1-201ENST00000436625 1469 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 RNU6-23P-201ENST00000363283 107 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 RNU6-1097P-201ENST00000363586 107 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 RNU4-91P-201ENST00000364778 135 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 RNU6-641P-201ENST00000384006 107 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 SNORA48.1-201ENST00000390879 135 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 RNU6-174P-201ENST00000410406 106 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 RPS3AP3-201ENST00000411933 242 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 MTND5P25-201ENST00000430499 799 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 MTATP6P16-201ENST00000434543 526 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 AC009961.2-201ENST00000435771 251 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 AC073614.1-201ENST00000438690 650 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 SNRPGP13-201ENST00000442212 177 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 HSPE1P24-201ENST00000450782 238 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 AC093259.1-201ENST00000509755 300 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 RNU1-86P-201ENST00000516108 154 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 SCARNA24.1-201ENST00000516465 137 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 RNU1-107P-201ENST00000516617 154 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 ZNF321P-202ENST00000550843 495 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 AC087883.1-201ENST00000551882 391 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 AC008015.1-201ENST00000555505 465 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 AC078795.2-201ENST00000602835 1252 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 AC010900.2-201ENST00000604508 210 ntBASIC1.7□□□□□ -2.14
CTNNA3Q9UI47 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 RNU5F-7P-201ENST00000363696 115 ntBASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 SNORD115-7-201ENST00000365306 82 ntBASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 RNU6-108P-201ENST00000365558 107 ntBASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 RNU2-3P-201ENST00000410144 191 ntBASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 MTND3P17-201ENST00000416968 344 ntBASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 AL357134.1-201ENST00000445848 426 ntBASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 AL353752.1-201ENST00000454946 260 ntBASIC1.69□□□□□ -2.14
CTNNA3Q9UI47 RPL30P1-201ENST00000488676 339 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms