Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 SNORA72.1-201ENST00000363485 129 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 Y_RNA.279-201ENST00000364763 95 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 U3.13-201ENST00000364804 214 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 RNU6-867P-201ENST00000364956 107 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 RNU6-43P-201ENST00000384302 107 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 RNU6-876P-201ENST00000391295 104 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 VN1R36P-201ENST00000414936 291 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 UBE2V1P4-201ENST00000425374 344 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 AC063976.3-201ENST00000426849 329 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 SUMO1P4-201ENST00000429430 302 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 USP9YP8-201ENST00000441913 500 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 AC025750.2-201ENST00000442609 450 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 AP000852.1-201ENST00000472460 573 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 RPL39P5-202ENST00000512505 151 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 MIR4446-201ENST00000578505 67 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 LARP7P3-201ENST00000579888 337 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 AL138963.2-201ENST00000605137 226 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 HMGB1P24-202ENST00000615653 685 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 MIR5739-201ENST00000619803 80 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 MIR1291-201ENST00000627649 87 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 MTND4P23-201ENST00000447723 1363 ntBASIC2.61□□□□□ -1.99
LIMA1Q9UHB6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 Y_RNA.160-201ENST00000363677 92 ntBASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 RNU1-138P-201ENST00000384093 164 ntBASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 AC022028.1-201ENST00000412054 408 ntBASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 AC236972.1-201ENST00000433225 199 ntBASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 AC026436.1-201ENST00000510537 270 ntBASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 RNU6-256P-201ENST00000516747 97 ntBASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 AC026371.1-201ENST00000551867 419 ntBASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 AP001836.1-201ENST00000604675 523 ntBASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 AL136221.1-201ENST00000621449 509 ntBASIC2.6□□□□□ -1.99
LIMA1Q9UHB6 RNU6-1285P-201ENST00000363480 105 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 RNU6-1141P-201ENST00000364520 107 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 SNORD32A-201ENST00000364805 84 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 CBX3P9-201ENST00000402326 552 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 RNU2-63P-201ENST00000410792 194 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 AL513328.1-201ENST00000446460 224 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 SNRPGP7-201ENST00000469016 106 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 RPL30P1-201ENST00000488676 339 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 CKS1BP2-201ENST00000497342 240 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 AC115990.1-201ENST00000526957 301 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 SCOCP1-201ENST00000554676 349 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 AC018638.8-201ENST00000588755 281 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 AL049779.4-201ENST00000604500 156 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 AL160281.1-201ENST00000605307 311 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 BNIP3P10-201ENST00000605360 577 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 MIR7106-201ENST00000612419 65 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 AC022306.2-201ENST00000617563 647 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 AC009033.1-201ENST00000624279 431 ntBASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.59□□□□□ -1.99
LIMA1Q9UHB6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.58□□□□□ -2
LIMA1Q9UHB6 AC062016.1-201ENST00000355719 319 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 RNU5E-4P-201ENST00000364931 120 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.58□□□□□ -2
LIMA1Q9UHB6 AP000275.1-201ENST00000411943 390 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 RPL21P111-201ENST00000418453 477 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.58□□□□□ -2
LIMA1Q9UHB6 AL031659.1-201ENST00000447075 539 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 AC108938.1-201ENST00000451204 136 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 AMD1P1-201ENST00000457220 922 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 CYP2C59P-201ENST00000457790 269 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 U8.21-201ENST00000459536 136 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 HMGN1P12-201ENST00000499125 195 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.58□□□□□ -2
LIMA1Q9UHB6 AC107222.1-201ENST00000510899 637 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 RNU6-507P-201ENST00000516045 100 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 RNU6-612P-201ENST00000516909 102 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 CBX3P7-201ENST00000532876 502 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 AC005730.3-201ENST00000583067 366 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 AL670379.2-201ENST00000604983 252 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 AL356157.2-201ENST00000605122 111 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 AC103810.6-201ENST00000606708 136 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 AL138726.1-201ENST00000614873 333 ntBASIC2.58□□□□□ -2
LIMA1Q9UHB6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
LIMA1Q9UHB6 Y_RNA.135-201ENST00000363439 95 ntBASIC2.57□□□□□ -2
LIMA1Q9UHB6 SNORD114-30-201ENST00000364448 72 ntBASIC2.57□□□□□ -2
LIMA1Q9UHB6 SNORA32.2-201ENST00000384049 122 ntBASIC2.57□□□□□ -2
LIMA1Q9UHB6 RNU6-1032P-201ENST00000384100 107 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms