Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RNA5SP390-201ENST00000410191 113 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 RNU6-1140P-201ENST00000410517 106 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 RN7SKP61-201ENST00000410642 295 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 AC093578.1-201ENST00000415219 368 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 snoU13.6-201ENST00000458785 104 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 RNU7-23P-201ENST00000459465 62 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 AC107626.1-201ENST00000471084 183 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 TRBVB-201ENST00000477100 408 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 AC025465.3-201ENST00000510570 311 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 Y_RNA.680-201ENST00000516441 93 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 AC016256.1-201ENST00000547971 354 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 AC023824.2-201ENST00000566185 400 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 MIR4738-201ENST00000579134 87 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 U3.45-201ENST00000607547 219 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 AC240442.1-201ENST00000616055 283 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 AC006111.3-201ENST00000622137 383 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 AP003355.3-201ENST00000623465 114 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 AC068647.1-201ENST00000489539 2265 ntBASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.35□□□□□ -1.87
KCMF1Q9P0J7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 Y_RNA.319-201ENST00000365138 92 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 RNU6-926P-201ENST00000384075 107 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 MIR218-2-201ENST00000385006 110 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 MIR591-201ENST00000385290 95 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 PTGES3P4-201ENST00000426243 356 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 EIF1P2-201ENST00000428233 350 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 AL445305.1-201ENST00000432577 575 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 BX679664.1-201ENST00000434429 253 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 HMGN2P20-201ENST00000437531 273 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 AC016700.2-201ENST00000446011 156 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 U3.44-201ENST00000458938 192 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 RN7SL594P-201ENST00000470590 287 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 AP002884.2-201ENST00000471647 395 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 RNU6-1114P-201ENST00000516022 107 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 Y_RNA.713-201ENST00000517013 96 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 AC026333.2-201ENST00000542164 106 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 MIR4659A-201ENST00000580269 81 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 AC091152.3-201ENST00000604227 325 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 Y_RNA.772-201ENST00000606692 102 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 AC019176.2-201ENST00000611579 315 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 MIR376A1-201ENST00000616574 68 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 AC012314.7-201ENST00000619693 93 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 AL450472.1-202ENST00000637286 180 ntBASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
KCMF1Q9P0J7 AL353746.1-201ENST00000566293 6881 ntBASIC3.34□□□□□ -1.88
KCMF1Q9P0J7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
KCMF1Q9P0J7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
KCMF1Q9P0J7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
KCMF1Q9P0J7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 MTND5P6-201ENST00000422338 1798 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 AC092268.1-201ENST00000342691 405 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 Y_RNA.14-201ENST00000362415 103 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 RNU6-212P-201ENST00000362642 104 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 RNU6-487P-201ENST00000365430 104 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 U8.10-201ENST00000384260 133 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 Y_RNA.477-201ENST00000384352 108 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 MIR215-201ENST00000384858 110 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 AL079342.1-201ENST00000401460 267 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 RNU2-20P-201ENST00000410425 191 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 AC245291.1-201ENST00000419501 328 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 AC078809.1-201ENST00000427601 140 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 ARL5AP4-201ENST00000430731 512 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 RPS15AP7-201ENST00000439294 405 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 RBMY2UP-201ENST00000453474 324 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 AC110768.1-201ENST00000509222 400 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 RNU2-27P-201ENST00000516185 142 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 RNU6-1012P-201ENST00000516606 109 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 AC027288.2-201ENST00000553028 243 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 UBL5P4-201ENST00000562584 236 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 AC136932.1-201ENST00000574771 208 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 MIR5695-201ENST00000579717 85 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 MIR3128-201ENST00000581957 66 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 AC069200.1-201ENST00000609511 323 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 MIR8058-201ENST00000615737 89 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms