Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
LIN7CQ9NUP9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 RNU4-15P-201ENST00000362613 141 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 RNA5SP72-201ENST00000364442 117 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 RNU4-9P-201ENST00000364951 139 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 Y_RNA.394-201ENST00000383942 103 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 MIR183-201ENST00000384958 110 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 YME1L1P1-201ENST00000429435 297 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 AC092427.1-202ENST00000430569 476 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 AP000705.1-201ENST00000454567 350 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 AC091826.1-201ENST00000514065 313 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 RNU6-264P-201ENST00000517134 104 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 IGKV2-26-201ENST00000518305 343 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 MIR3923-201ENST00000579521 83 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 MIR3616-201ENST00000584070 92 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 7SK.7-201ENST00000603504 247 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 AC012314.7-201ENST00000619693 93 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 AC091903.1-201ENST00000624322 454 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 SCARNA4-201ENST00000629045 128 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 AL356274.2-201ENST00000624379 3752 ntBASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.7□□□□□ -1.98
LIN7CQ9NUP9 AL353743.1-202ENST00000431724 1695 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 MIR148B-201ENST00000362252 99 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 RNU1-33P-201ENST00000364249 162 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 Y_RNA.813-201ENST00000364639 102 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 DYNLT3P1-201ENST00000378574 347 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 RNU6-1040P-201ENST00000383974 107 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 MTCO3P29-201ENST00000432119 779 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 AL353705.1-201ENST00000433468 480 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 RPL21P10-201ENST00000463521 490 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 RPL30P10-201ENST00000488148 337 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 RPL17P19-201ENST00000489069 552 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 AC145146.1-201ENST00000496370 254 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 RNU6-1170P-201ENST00000515974 106 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 RNU6-567P-201ENST00000516746 107 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 AP000889.1-201ENST00000530968 660 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 AC007458.1-201ENST00000542812 373 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 CYP4A27P-201ENST00000567218 190 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 U6.105-201ENST00000637379 88 ntBASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LIN7CQ9NUP9 SNORA71.3-201ENST00000362582 128 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 SNORA12.2-201ENST00000391040 156 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 RNA5SP229-201ENST00000410809 99 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 HMGB3P2-201ENST00000411913 584 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 AC104332.2-201ENST00000429959 156 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 UQCRHP3-201ENST00000451503 251 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 snoU13.30-201ENST00000458951 104 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 RN7SKP210-201ENST00000459176 261 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 RN7SKP272-201ENST00000516988 232 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 SNORA31.26-201ENST00000517250 137 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 MIR5701-3-201ENST00000578890 82 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 MIR3944-201ENST00000581277 108 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 MIR4276-201ENST00000584832 70 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 MIR5701-1-201ENST00000585138 82 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 AC023043.3-201ENST00000593113 385 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 MIR5701-2-201ENST00000615634 82 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 MIR5739-201ENST00000619803 80 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 AC069528.2-201ENST00000624849 1991 ntBASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
LIN7CQ9NUP9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 MIR369-201ENST00000362155 70 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 RNU1-70P-201ENST00000362618 164 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 RNU6-694P-201ENST00000364071 147 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 SNORD56.5-201ENST00000364281 72 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 RNU6-99P-201ENST00000364721 107 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 Y_RNA.405-201ENST00000383979 100 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 Y_RNA.451-201ENST00000384200 100 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 Y_RNA.524-201ENST00000384564 100 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 Y_RNA.561-201ENST00000384694 100 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 MIR32-201ENST00000384965 70 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 MIR559-201ENST00000385188 96 ntBASIC2.67□□□□□ -1.98
LIN7CQ9NUP9 U3.19-201ENST00000390893 196 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms