Protein–RNA interactions for Protein: Q9NQ50

MRPL40, 39S ribosomal protein L40, mitochondrial, humanhuman

Known RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40Q9NQ50 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 LARP1BP3-201ENST00000437229 869 ntBASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 MTCO3P43-201ENST00000440974 771 ntBASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 AC069257.2-201ENST00000441819 155 ntBASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 MTND1P31-201ENST00000449206 961 ntBASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 AC021146.8-201ENST00000507455 733 ntBASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 RNU6-551P-201ENST00000516661 103 ntBASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 AC092451.2-201ENST00000538746 658 ntBASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 AC025423.5-201ENST00000550230 219 ntBASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 AL109933.3-201ENST00000619095 188 ntBASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 AL159153.1-201ENST00000619688 317 ntBASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 AC245060.5-201ENST00000610778 3293 ntBASIC0.46□□□□□ -2.34
MRPL40Q9NQ50 RNA5SP361-201ENST00000362686 118 ntBASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 Y_RNA.85-201ENST00000363014 111 ntBASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 RNU6-792P-201ENST00000363490 107 ntBASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 AC016831.2-201ENST00000417179 352 ntBASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 AL590556.1-201ENST00000423231 483 ntBASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 AC013262.1-201ENST00000426710 252 ntBASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 AL591704.1-201ENST00000432574 275 ntBASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 SNRPEP7-201ENST00000438350 220 ntBASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 AL008629.1-201ENST00000438615 184 ntBASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 RNU7-59P-201ENST00000459101 61 ntBASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 AC005741.1-201ENST00000511094 432 ntBASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 AL121579.1-201ENST00000555129 305 ntBASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.45□□□□□ -2.34
MRPL40Q9NQ50 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 AL356776.1-201ENST00000406574 447 ntBASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 RNA5SP511-201ENST00000410487 115 ntBASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 RAB28P5-201ENST00000427490 651 ntBASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 AC002429.1-201ENST00000437672 148 ntBASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 RPL18AP17-201ENST00000455326 198 ntBASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 AP003355.1-201ENST00000518956 587 ntBASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 AC104417.1-201ENST00000523974 751 ntBASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 MTCYBP33-201ENST00000575007 1130 ntBASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 AL358072.1-201ENST00000604156 575 ntBASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 AC063943.3-201ENST00000615562 356 ntBASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.44□□□□□ -2.34
MRPL40Q9NQ50 VTRNA1-3-201ENST00000365645 89 ntBASIC0.43□□□□□ -2.34
MRPL40Q9NQ50 MIR1197-201ENST00000408818 88 ntBASIC0.43□□□□□ -2.34
MRPL40Q9NQ50 AC099677.2-201ENST00000436385 175 ntBASIC0.43□□□□□ -2.34
MRPL40Q9NQ50 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.43□□□□□ -2.34
MRPL40Q9NQ50 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.43□□□□□ -2.34
MRPL40Q9NQ50 AC074344.1-201ENST00000512823 224 ntBASIC0.43□□□□□ -2.34
MRPL40Q9NQ50 RNU6-1315P-201ENST00000517187 99 ntBASIC0.43□□□□□ -2.34
MRPL40Q9NQ50 AC091163.3-201ENST00000518269 1144 ntBASIC0.43□□□□□ -2.34
MRPL40Q9NQ50 AL590705.4-201ENST00000532209 134 ntBASIC0.43□□□□□ -2.34
MRPL40Q9NQ50 AC018659.1-201ENST00000551083 169 ntBASIC0.43□□□□□ -2.34
MRPL40Q9NQ50 VN1R82P-201ENST00000601481 356 ntBASIC0.43□□□□□ -2.34
MRPL40Q9NQ50 AP001596.2-201ENST00000608410 312 ntBASIC0.43□□□□□ -2.34
MRPL40Q9NQ50 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.43□□□□□ -2.34
MRPL40Q9NQ50 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.43□□□□□ -2.34
MRPL40Q9NQ50 MIR340-201ENST00000362125 95 ntBASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 Y_RNA.124-201ENST00000363339 93 ntBASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 Y_RNA.251-201ENST00000364551 99 ntBASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 AC083799.1-201ENST00000366451 910 ntBASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 MIR605-201ENST00000385078 83 ntBASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 RNA5SP127-201ENST00000411051 133 ntBASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 DEFB130D-201ENST00000426866 237 ntBASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 MTCO1P3-201ENST00000429327 192 ntBASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 AL358794.1-201ENST00000445689 381 ntBASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 AC098869.1-201ENST00000481627 292 ntBASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 AK3P2-201ENST00000507976 429 ntBASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 AC092325.1-201ENST00000566449 554 ntBASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 AC122134.1-202ENST00000569111 1201 ntBASIC0.42□□□□□ -2.34
MRPL40Q9NQ50 MIR16-2-201ENST00000362117 81 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 RNU6-222P-201ENST00000362438 107 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 RNU6-744P-201ENST00000365557 107 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 RNU6-1316P-201ENST00000384242 108 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 Y_RNA.534-201ENST00000384599 112 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 RNU6-910P-201ENST00000390844 107 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 RAP1BP3-201ENST00000407180 549 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 MTCO3P29-201ENST00000432119 779 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 snoU13.30-201ENST00000458951 104 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 RNU6-953P-201ENST00000459154 107 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 RPL39P38-201ENST00000467018 153 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 RPS26P45-201ENST00000471748 340 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 AC026414.1-201ENST00000504046 698 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 AC060771.1-201ENST00000582031 164 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 AC105148.1-201ENST00000604961 409 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 AC106858.1-201ENST00000637497 429 ntBASIC0.41□□□□□ -2.34
MRPL40Q9NQ50 RNU6-1123P-201ENST00000362347 106 ntBASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 RNU6-650P-201ENST00000365658 111 ntBASIC0.4□□□□□ -2.35
MRPL40Q9NQ50 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms