Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.42□□□□□ -2.02
SIX2Q9NPC8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.42□□□□□ -2.02
SIX2Q9NPC8 CR383656.8-201ENST00000549046 145 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.42□□□□□ -2.02
SIX2Q9NPC8 AC091152.3-201ENST00000604227 325 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SIX2Q9NPC8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.42□□□□□ -2.02
SIX2Q9NPC8 AC010889.1-201ENST00000566193 2666 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
SIX2Q9NPC8 AC091564.4-201ENST00000533934 2194 ntBASIC2.42□□□□□ -2.02
SIX2Q9NPC8 RNU1-105P-201ENST00000363470 161 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 RNU6-799P-201ENST00000363567 107 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 RNU6-306P-201ENST00000384617 107 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 MIR517A-201ENST00000385001 87 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 RNU6-370P-201ENST00000411008 104 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 RNU6-325P-201ENST00000411132 105 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.41□□□□□ -2.02
SIX2Q9NPC8 AC092427.1-202ENST00000430569 476 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.41□□□□□ -2.02
SIX2Q9NPC8 MED28P2-201ENST00000475771 317 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 AC018437.1-201ENST00000492214 406 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 RPL23AP49-201ENST00000492925 468 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 GZMAP1-201ENST00000503054 631 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.41□□□□□ -2.02
SIX2Q9NPC8 RNU1-54P-201ENST00000517181 120 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.41□□□□□ -2.02
SIX2Q9NPC8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.41□□□□□ -2.02
SIX2Q9NPC8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.41□□□□□ -2.02
SIX2Q9NPC8 FRG2DP-202ENST00000566967 323 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 AC009163.5-201ENST00000575421 637 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 CPDP1-201ENST00000579660 283 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 VN1R107P-201ENST00000601784 209 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 AL133215.3-201ENST00000609801 448 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 AC009831.4-201ENST00000620744 325 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 AC090617.7-201ENST00000623952 126 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 AC005336.3-201ENST00000623833 2679 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 MTND5P6-201ENST00000422338 1798 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 AC080100.1-201ENST00000624239 5356 ntBASIC2.41□□□□□ -2.02
SIX2Q9NPC8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.4□□□□□ -2.02
SIX2Q9NPC8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
SIX2Q9NPC8 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SIX2Q9NPC8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.4□□□□□ -2.02
SIX2Q9NPC8 AC004944.1-201ENST00000517807 3059 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SIX2Q9NPC8 Y_RNA.11-201ENST00000362375 109 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 RNU6-858P-201ENST00000362436 107 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 VTRNA1-1-201ENST00000363120 99 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 RNU6-1317P-201ENST00000364582 104 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 RNU6-1297P-201ENST00000384415 104 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 MIR221-201ENST00000385135 110 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 MIR767-201ENST00000390228 109 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.4□□□□□ -2.03
SIX2Q9NPC8 PTGES3P4-201ENST00000426243 356 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.4□□□□□ -2.03
SIX2Q9NPC8 RPS27P26-201ENST00000494583 239 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 PTP4A1P4-201ENST00000512479 322 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 AC026782.1-201ENST00000512952 449 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.4□□□□□ -2.03
SIX2Q9NPC8 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.4□□□□□ -2.03
SIX2Q9NPC8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.4□□□□□ -2.03
SIX2Q9NPC8 APOOP3-201ENST00000536787 586 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.4□□□□□ -2.03
SIX2Q9NPC8 DNAJC8P1-201ENST00000554535 372 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.4□□□□□ -2.03
SIX2Q9NPC8 MIR5002-201ENST00000584713 97 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 RPL12P50-201ENST00000603116 116 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 AC018462.2-201ENST00000605375 395 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 AC124303.1-201ENST00000605703 360 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 AC098657.3-201ENST00000620434 263 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 AC110079.1-202ENST00000635213 138 ntBASIC2.4□□□□□ -2.03
SIX2Q9NPC8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SIX2Q9NPC8 AC103988.1-201ENST00000566382 2177 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SIX2Q9NPC8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.39□□□□□ -2.03
SIX2Q9NPC8 CD24P4-201ENST00000382840 243 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 SNORD116-29-201ENST00000384516 83 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 RNU6-748P-201ENST00000384648 107 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 RNU6-19P-201ENST00000384718 107 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SIX2Q9NPC8 AC074117.2-201ENST00000417130 397 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.39□□□□□ -2.03
SIX2Q9NPC8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.39□□□□□ -2.03
SIX2Q9NPC8 PCMTD1P1-201ENST00000455560 355 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 SNORD5.1-201ENST00000458800 75 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 SNORD19B-201ENST00000459623 84 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 RPL9P9-202ENST00000466501 579 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.39□□□□□ -2.03
SIX2Q9NPC8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 RNA5SP24-201ENST00000516478 95 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 SNORA31.11-201ENST00000516528 139 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 AC010186.2-204ENST00000537668 439 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 GLYCAM1-201ENST00000546596 285 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.39□□□□□ -2.03
SIX2Q9NPC8 BNIP3P16-201ENST00000589779 534 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 AL391813.1-201ENST00000603098 260 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 AL050343.2-201ENST00000607338 280 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 AC019193.3-201ENST00000609144 554 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 AC002064.3-201ENST00000623448 346 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms