Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RNU2-32P-201ENST00000411193 191 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 RNU6-293P-201ENST00000411259 106 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.51□□□□□ -2.17
HMG20AQ9NP66 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.51□□□□□ -2.17
HMG20AQ9NP66 AC073464.1-201ENST00000429823 534 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 AL606489.2-201ENST00000433886 234 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 AC002486.1-201ENST00000435098 391 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 AC073415.1-201ENST00000449240 153 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 AL356010.1-201ENST00000456364 102 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 AC006026.2-201ENST00000457376 180 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 RPL31P3-201ENST00000458430 332 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 RNU7-180P-201ENST00000459240 63 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 snoU13.14-201ENST00000459372 104 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 TRBV12-1-201ENST00000479785 344 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 AC079382.1-201ENST00000493346 557 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 RPS29P21-201ENST00000496272 170 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 AC009646.1-201ENST00000510455 318 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 RN7SKP298-201ENST00000515950 94 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 RNU6-377P-201ENST00000515965 102 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 AC103996.1-201ENST00000555468 102 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 AL031274.2-201ENST00000599419 203 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HMG20AQ9NP66 AL354950.2-201ENST00000617939 290 ntBASIC1.51□□□□□ -2.17
HMG20AQ9NP66 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMG20AQ9NP66 ZNF702P-202ENST00000434269 1966 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.5□□□□□ -2.17
HMG20AQ9NP66 Y_RNA.1-201ENST00000352915 104 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 RNA5SP276-201ENST00000362580 94 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 Y_RNA.51-201ENST00000362725 102 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 SNORD115-3-201ENST00000363100 82 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 RNU6-743P-201ENST00000364151 106 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 Y_RNA.296-201ENST00000364930 108 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 RNU6-1103P-201ENST00000384150 107 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 SNORA70B-201ENST00000384210 135 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 SNORD116-2-201ENST00000384274 95 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 SNORD116-6-201ENST00000384711 96 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.5□□□□□ -2.17
HMG20AQ9NP66 USP9YP14-201ENST00000430663 563 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AC003989.2-201ENST00000440224 169 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AL031274.1-201ENST00000450334 232 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.5□□□□□ -2.17
HMG20AQ9NP66 SNRPFP3-201ENST00000457792 225 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.5□□□□□ -2.17
HMG20AQ9NP66 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.5□□□□□ -2.17
HMG20AQ9NP66 RNU7-63P-201ENST00000459054 62 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 GMFBP1-201ENST00000467831 427 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 RPL30P1-201ENST00000488676 339 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AC108078.1-201ENST00000508073 725 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AC091133.4-201ENST00000511142 308 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AC105417.1-201ENST00000514691 285 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 LRRC34P2-201ENST00000514850 553 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 RNU5F-2P-201ENST00000516066 82 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 RNU6-1038P-201ENST00000516516 104 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AP000763.2-201ENST00000540641 163 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 HSBP1P1-201ENST00000555205 166 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AC091135.1-201ENST00000585943 307 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AL136363.2-201ENST00000604173 851 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AC107304.1-201ENST00000604229 296 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AP001596.2-201ENST00000608410 312 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AC068944.2-201ENST00000610373 403 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 AC007792.1-201ENST00000623023 402 ntBASIC1.5□□□□□ -2.17
HMG20AQ9NP66 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
HMG20AQ9NP66 AP000648.3-201ENST00000623539 4507 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 RNU6-996P-201ENST00000365438 107 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 RNU6-827P-201ENST00000365553 106 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 RNU6-1119P-201ENST00000384349 108 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 MIR9-3-201ENST00000385084 90 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 HMGN2P39-201ENST00000398005 273 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 AL356432.1-201ENST00000405809 419 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 MIR1262-201ENST00000408276 93 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 MIR1294-201ENST00000408503 142 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 RNU4-26P-201ENST00000410270 107 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.49□□□□□ -2.17
HMG20AQ9NP66 AC096920.1-201ENST00000423991 241 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.49□□□□□ -2.17
HMG20AQ9NP66 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.49□□□□□ -2.17
HMG20AQ9NP66 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.49□□□□□ -2.17
HMG20AQ9NP66 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.49□□□□□ -2.17
HMG20AQ9NP66 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.49□□□□□ -2.17
HMG20AQ9NP66 SNORA59A-201ENST00000459326 152 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 AC107032.1-201ENST00000485945 480 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 RPS29P11-201ENST00000496507 171 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.49□□□□□ -2.17
HMG20AQ9NP66 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.49□□□□□ -2.17
HMG20AQ9NP66 AL137161.1-201ENST00000532231 390 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.49□□□□□ -2.17
HMG20AQ9NP66 NDUFA5P6-201ENST00000542110 379 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 MTCO3P23-201ENST00000561363 289 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 AL670379.2-201ENST00000604983 252 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 uc_338.5-201ENST00000611839 155 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 AL132822.1-201ENST00000617063 513 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 AC241585.2-209ENST00000638217 143 ntBASIC1.49□□□□□ -2.17
HMG20AQ9NP66 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HMG20AQ9NP66 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 SNORD114-1-201ENST00000362705 72 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms