Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PCDH9Q9HC56 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCDH9Q9HC56 AC008669.1-201ENST00000565823 2178 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 AC135776.4-201ENST00000624300 1904 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 AC010889.1-201ENST00000566193 2666 ntBASIC2.64□□□□□ -1.99
PCDH9Q9HC56 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
PCDH9Q9HC56 MTND4P23-201ENST00000447723 1363 ntBASIC2.63□□□□□ -1.99
PCDH9Q9HC56 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PCDH9Q9HC56 RNU6-1059P-201ENST00000363752 98 ntBASIC2.63□□□□□ -1.99
PCDH9Q9HC56 Y_RNA.482-201ENST00000384377 111 ntBASIC2.63□□□□□ -1.99
PCDH9Q9HC56 MIR521-1-201ENST00000384902 87 ntBASIC2.63□□□□□ -1.99
PCDH9Q9HC56 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PCDH9Q9HC56 USP9YP30-201ENST00000430729 455 ntBASIC2.63□□□□□ -1.99
PCDH9Q9HC56 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDH9Q9HC56 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PCDH9Q9HC56 UBE2V1P7-201ENST00000446395 340 ntBASIC2.63□□□□□ -1.99
PCDH9Q9HC56 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDH9Q9HC56 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDH9Q9HC56 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.63□□□□□ -1.99
PCDH9Q9HC56 RPS27P26-201ENST00000494583 239 ntBASIC2.63□□□□□ -1.99
PCDH9Q9HC56 CKS1BP7-201ENST00000522230 235 ntBASIC2.63□□□□□ -1.99
PCDH9Q9HC56 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.63□□□□□ -1.99
PCDH9Q9HC56 APOOP3-201ENST00000536787 586 ntBASIC2.63□□□□□ -1.99
PCDH9Q9HC56 IMMP1LP2-201ENST00000552954 492 ntBASIC2.63□□□□□ -1.99
PCDH9Q9HC56 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDH9Q9HC56 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.63□□□□□ -1.99
PCDH9Q9HC56 AC124303.1-201ENST00000605703 360 ntBASIC2.63□□□□□ -1.99
PCDH9Q9HC56 PISRT1.1-201ENST00000616930 107 ntBASIC2.63□□□□□ -1.99
PCDH9Q9HC56 AC010297.1-201ENST00000623948 149 ntBASIC2.63□□□□□ -1.99
PCDH9Q9HC56 Y_RNA.11-201ENST00000362375 109 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 RNU1-105P-201ENST00000363470 161 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 MTCYBP4-201ENST00000401524 249 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 RNU6-1050P-201ENST00000410388 107 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 MTCO2P27-201ENST00000420740 428 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 NUP35P1-201ENST00000422734 947 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 AC009414.1-201ENST00000427200 443 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 MTND3P9-201ENST00000429526 346 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 AC236972.2-201ENST00000434979 310 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 FTH1P25-201ENST00000447665 469 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 RPL30P15-201ENST00000457129 321 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 SNRPGP7-201ENST00000469016 106 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 MED28P2-201ENST00000475771 317 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDH9Q9HC56 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 RNU6-1016P-201ENST00000516689 94 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 AC009163.5-201ENST00000575421 637 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.62□□□□□ -1.99
PCDH9Q9HC56 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.62□□□□□ -1.99
PCDH9Q9HC56 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 AC091152.3-201ENST00000604227 325 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 AL133255.1-201ENST00000606374 441 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 AC092608.2-201ENST00000624427 218 ntBASIC2.62□□□□□ -1.99
PCDH9Q9HC56 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PCDH9Q9HC56 Y_RNA.2-201ENST00000362330 96 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 RNU6-105P-201ENST00000363909 104 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 SET-203ENST00000372688 801 ntTSL 2 BASIC2.61□□□□□ -1.99
PCDH9Q9HC56 MIR196B-201ENST00000384852 84 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 MIR147B-201ENST00000390185 80 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 RNU6-750P-201ENST00000390946 107 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AL139095.1-201ENST00000404326 391 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AL513475.1-201ENST00000406602 315 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 RNU6-1245P-201ENST00000411130 106 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AC074117.2-201ENST00000417130 397 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 PTGES3P4-201ENST00000426243 356 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AC236972.1-201ENST00000433225 199 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AC009296.1-201ENST00000443146 155 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AC108938.1-201ENST00000451204 136 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AC013470.1-201ENST00000453438 462 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 U8.21-201ENST00000459536 136 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AC107626.1-201ENST00000471084 183 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 RPL7P42-201ENST00000481005 679 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AC026782.1-201ENST00000512952 449 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 RNU5F-8P-201ENST00000515941 111 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 Y_RNA.670-201ENST00000516255 105 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 RNU6-612P-201ENST00000516909 102 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.61□□□□□ -1.99
PCDH9Q9HC56 CR383656.8-201ENST00000549046 145 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDH9Q9HC56 MIR5690-201ENST00000583739 73 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 RPL12P50-201ENST00000603116 116 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AL050343.2-201ENST00000607338 280 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AC009229.3-201ENST00000608056 282 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AC126177.8-201ENST00000618339 1015 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 AC090574.1-201ENST00000623186 233 ntBASIC2.61□□□□□ -1.99
PCDH9Q9HC56 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
PCDH9Q9HC56 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PCDH9Q9HC56 RNA5SP393-201ENST00000363423 117 ntBASIC2.6□□□□□ -1.99
PCDH9Q9HC56 SNORD116-29-201ENST00000384516 83 ntBASIC2.6□□□□□ -1.99
PCDH9Q9HC56 SNORA75.4-201ENST00000391278 119 ntBASIC2.6□□□□□ -1.99
PCDH9Q9HC56 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PCDH9Q9HC56 Y_RNA.594-201ENST00000410373 140 ntBASIC2.6□□□□□ -1.99
PCDH9Q9HC56 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.6□□□□□ -1.99
PCDH9Q9HC56 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.6□□□□□ -1.99
PCDH9Q9HC56 AC124916.1-201ENST00000444020 547 ntBASIC2.6□□□□□ -1.99
PCDH9Q9HC56 AL109933.2-201ENST00000452651 260 ntBASIC2.6□□□□□ -1.99
PCDH9Q9HC56 SNORD19B-201ENST00000459623 84 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms