Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 Y_RNA.135-201ENST00000363439 95 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 RNA5SP240-201ENST00000365355 128 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 CBX3P9-201ENST00000402326 552 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 RNU6-1140P-201ENST00000410517 106 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 AC003685.2-201ENST00000422795 395 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 MTND4LP16-201ENST00000440828 295 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 AC104389.3-201ENST00000445629 235 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 CYP2C59P-201ENST00000457790 269 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 snoU13.26-201ENST00000459452 105 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 AC003982.1-202ENST00000469928 248 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 RPL30P12-201ENST00000474666 353 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 RPL30P1-201ENST00000488676 339 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 MTCO1P29-201ENST00000496868 288 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 PRDX4P1-201ENST00000507189 574 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 AC096745.1-201ENST00000509945 370 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 RNU2-53P-201ENST00000516257 147 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 AP000889.2-201ENST00000532684 490 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 ZNF861P-201ENST00000588126 639 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 AC023043.2-201ENST00000589678 1026 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 AP001836.1-201ENST00000604675 523 ntBASIC2.59□□□□□ -1.99
POLR1BQ9H9Y6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.59□□□□□ -2
POLR1BQ9H9Y6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.59□□□□□ -2
POLR1BQ9H9Y6 RNU6-212P-201ENST00000362642 104 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 U8.2-201ENST00000363156 134 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 RNU6-1285P-201ENST00000363480 105 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 RNU6-692P-201ENST00000384496 107 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 MIR504-201ENST00000385065 83 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 RN7SKP61-201ENST00000410642 295 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.58□□□□□ -2
POLR1BQ9H9Y6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.58□□□□□ -2
POLR1BQ9H9Y6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.58□□□□□ -2
POLR1BQ9H9Y6 RPL30P16-201ENST00000419341 429 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 AC008267.5-201ENST00000424928 265 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 AIMP1P2-201ENST00000425294 312 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 AC078809.1-201ENST00000427601 140 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 RBMX2P4-201ENST00000441256 376 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.58□□□□□ -2
POLR1BQ9H9Y6 AL121594.1-201ENST00000475906 575 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 AC090096.1-201ENST00000489168 390 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 AC022447.4-201ENST00000504053 364 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 ANXA2P1-201ENST00000505539 926 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 SNORA25.11-201ENST00000515935 105 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 AC104576.1-201ENST00000524225 88 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.58□□□□□ -2
POLR1BQ9H9Y6 TRAV32-201ENST00000553993 340 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 MIR3672-201ENST00000584290 82 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 RPL30P11-203ENST00000598995 310 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 RBM11P1-201ENST00000604951 799 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 AL136221.1-201ENST00000621449 509 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
POLR1BQ9H9Y6 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.58□□□□□ -2
POLR1BQ9H9Y6 AC092593.1-201ENST00000515413 1815 ntBASIC2.58□□□□□ -2
POLR1BQ9H9Y6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
POLR1BQ9H9Y6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.58□□□□□ -2
POLR1BQ9H9Y6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
POLR1BQ9H9Y6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
POLR1BQ9H9Y6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.57□□□□□ -2
POLR1BQ9H9Y6 MIR6073-201ENST00000352083 89 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 SNORD32A-201ENST00000364805 84 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 RNU6-831P-201ENST00000384548 107 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.57□□□□□ -2
POLR1BQ9H9Y6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
POLR1BQ9H9Y6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.57□□□□□ -2
POLR1BQ9H9Y6 AL356776.1-201ENST00000406574 447 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 RNU2-63P-201ENST00000410792 194 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.57□□□□□ -2
POLR1BQ9H9Y6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.57□□□□□ -2
POLR1BQ9H9Y6 MTCO3P46-201ENST00000425787 232 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 RPL23AP95-201ENST00000426806 265 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 AC073901.1-201ENST00000462471 408 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 AC018710.1-201ENST00000506509 158 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.57□□□□□ -2
POLR1BQ9H9Y6 AC008549.1-201ENST00000512900 643 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.57□□□□□ -2
POLR1BQ9H9Y6 AC087241.2-201ENST00000535801 324 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.57□□□□□ -2
POLR1BQ9H9Y6 MIR5194-201ENST00000582634 120 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 AC104237.2-201ENST00000612456 443 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 AC008121.3-201ENST00000618726 433 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 CTSLP2-204ENST00000629029 392 ntBASIC2.57□□□□□ -2
POLR1BQ9H9Y6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.57□□□□□ -2
POLR1BQ9H9Y6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
POLR1BQ9H9Y6 RNU6-562P-201ENST00000362731 107 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 RNU6-227P-201ENST00000362865 103 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 RNU1-72P-201ENST00000362976 153 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 RNU6-43P-201ENST00000384302 107 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 MIR95-201ENST00000385072 81 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 RNA5SP181-201ENST00000410246 98 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 RNU6-1148P-201ENST00000410992 104 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 AL030996.1-201ENST00000411430 235 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.56□□□□□ -2
POLR1BQ9H9Y6 AL133396.1-201ENST00000432048 687 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.56□□□□□ -2
POLR1BQ9H9Y6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.56□□□□□ -2
POLR1BQ9H9Y6 RPL9P9-202ENST00000466501 579 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 AC140059.1-201ENST00000489238 361 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.56□□□□□ -2
POLR1BQ9H9Y6 AC046134.1-201ENST00000514454 666 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 RNU6-612P-201ENST00000516909 102 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms