Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 RNU6-1109P-201ENST00000391187 107 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 Y_RNA.592-201ENST00000410274 109 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 AC023141.4-201ENST00000412031 328 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 EIF1AXP1-201ENST00000419267 435 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 AC012308.1-201ENST00000451232 178 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 SSXP4-201ENST00000451349 245 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 AP002884.2-201ENST00000471647 395 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 AC110794.1-201ENST00000505816 425 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 RPL23AP94-201ENST00000512518 302 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 RNU6-911P-201ENST00000516523 104 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 AP000867.2-201ENST00000532468 320 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 MIR4474-201ENST00000579189 78 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 AC006557.5-201ENST00000603126 811 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 U4.1-201ENST00000620349 87 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 MIR3529-201ENST00000637713 78 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
AMBRA1Q9C0C7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
AMBRA1Q9C0C7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.09□□□□□ -1.92
AMBRA1Q9C0C7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 SET-203ENST00000372688 801 ntTSL 2 BASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 RNU6-198P-201ENST00000384258 104 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 RNU6-843P-201ENST00000384454 104 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 Y_RNA.551-201ENST00000384661 102 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 Y_RNA.574-201ENST00000384766 95 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 MIR544A-201ENST00000384855 91 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 MIR128-1-201ENST00000384921 82 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 SNORD17-201ENST00000390930 237 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 RNA5SP38-201ENST00000410750 119 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 MTCO3P29-201ENST00000432119 779 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 AC009969.1-201ENST00000438726 172 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 snoU13.30-201ENST00000458951 104 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 RN7SL75P-201ENST00000461926 281 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 MED28P2-201ENST00000475771 317 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 AC010655.3-201ENST00000478818 450 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 AC025518.1-201ENST00000479856 347 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 AC092185.1-201ENST00000491371 97 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 RPL23AP75-201ENST00000491601 451 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 AC104564.1-201ENST00000493028 407 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 MRPS35P2-201ENST00000508242 191 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 RNA5SP217-201ENST00000515959 91 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 Y_RNA.715-201ENST00000517082 110 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 AC004817.2-201ENST00000561794 651 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 RPS29P30-201ENST00000600975 111 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 AC100812.1-201ENST00000607622 580 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 AC007792.1-201ENST00000623023 402 ntBASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
AMBRA1Q9C0C7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 RNU6-874P-201ENST00000362390 105 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 SNORD32A-201ENST00000364805 84 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 RNU4-9P-201ENST00000364951 139 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 SNORA63.7-201ENST00000365579 123 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 Y_RNA.401-201ENST00000383965 117 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 RNU6-26P-201ENST00000383985 107 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 RNU6-968P-201ENST00000384076 107 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 SNORA48.2-201ENST00000390926 124 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 AC114482.1-201ENST00000418010 247 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 CST9LP2-201ENST00000437612 320 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 AL161651.1-201ENST00000440882 223 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 AC115115.1-201ENST00000449927 248 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 RNU7-23P-201ENST00000459465 62 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 UBE2DNL-203ENST00000474922 222 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 RPS26P21-201ENST00000475397 348 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 AL049873.1-201ENST00000480540 376 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 Y_RNA.706-201ENST00000516933 99 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 ACA59.2-201ENST00000517061 156 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 IGKV2-26-201ENST00000518305 343 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 AC091144.1-201ENST00000519573 138 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 AC131281.1-201ENST00000522984 164 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 AL161670.1-201ENST00000554348 137 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 AC006006.1-201ENST00000603082 144 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 MIR6852-201ENST00000621699 66 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 AC243829.7-201ENST00000633081 225 ntBASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
AMBRA1Q9C0C7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
AMBRA1Q9C0C7 RNU1-70P-201ENST00000362618 164 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms