Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RPL21P28-201ENST00000401418 483 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 MIR548F4-201ENST00000408515 105 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 HMGB3P2-201ENST00000411913 584 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 RPS26P42-201ENST00000413485 326 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 AL590556.1-201ENST00000423231 483 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 RPL23AP22-201ENST00000437556 453 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 RPS3AP12-201ENST00000443616 753 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 MTCO3P8-201ENST00000453691 755 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 U8.20-201ENST00000459445 131 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 RPL21P39-201ENST00000463605 483 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 AL049830.2-201ENST00000480072 201 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 AC087190.1-201ENST00000484462 480 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 AC107032.1-201ENST00000485945 480 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 AC132942.1-201ENST00000486753 483 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 AC093591.1-201ENST00000491435 481 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 RPL21P16-201ENST00000495531 483 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 CYP4A27P-201ENST00000567218 190 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 AC099654.7-201ENST00000635788 2127 ntBASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM55Q9BYV6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 Y_RNA.133-201ENST00000363428 110 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 Y_RNA.380-201ENST00000365663 111 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 RNU6-708P-201ENST00000384217 107 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 RNU6-541P-201ENST00000384709 110 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 RNU1-139P-201ENST00000391307 165 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 NDUFB1P1-201ENST00000435191 180 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 RPL23AP70-201ENST00000483361 460 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 RNA5SP112-201ENST00000515937 99 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 RNU2-53P-201ENST00000516257 147 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 Y_RNA.715-201ENST00000517082 110 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 MIR2355-201ENST00000517199 87 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 AC093331.1-201ENST00000521474 169 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 AL442163.3-201ENST00000554110 156 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 AC103810.1-201ENST00000579873 453 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 AC084757.4-201ENST00000616350 526 ntBASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM55Q9BYV6 AL161912.2-201ENST00000565707 3007 ntBASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 OR56A5-201ENST00000340110 738 ntBASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 SNORA51.11-201ENST00000384442 131 ntBASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 U3.19-201ENST00000390893 196 ntBASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 RNA5SP424-201ENST00000390988 115 ntBASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 MIR1252-201ENST00000408861 65 ntBASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 DPH3P2-201ENST00000422618 250 ntBASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 AC110768.1-201ENST00000509222 400 ntBASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 RNU6-1114P-201ENST00000516022 107 ntBASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 AL133393.1-201ENST00000603277 287 ntBASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 AC007179.3-201ENST00000604976 235 ntBASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 SNORA62.6-201ENST00000606322 83 ntBASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 AC019176.2-201ENST00000611579 315 ntBASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 AC110774.1-201ENST00000623567 2018 ntBASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM55Q9BYV6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.65□□□□□ -1.82
TRIM55Q9BYV6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 SNORD115-8-201ENST00000363856 82 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 RNU4-50P-201ENST00000364361 141 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 RNA5SP97-201ENST00000365006 84 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 SNORD115-38-201ENST00000365037 82 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 CBX3P9-201ENST00000402326 552 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 EIF4EP4-201ENST00000424916 578 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 SEM1P1-201ENST00000506694 209 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 MTND4LP22-201ENST00000508209 276 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 RNA5SP164-201ENST00000516533 110 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 SCARNA14-201ENST00000516903 136 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 RNU6-58P-201ENST00000517143 103 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 AC022868.1-201ENST00000517767 391 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 MIR3923-201ENST00000579521 83 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 RPS29P30-201ENST00000600975 111 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 AL355297.3-201ENST00000604082 446 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 AL138963.2-201ENST00000605137 226 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 RNU1-30P-201ENST00000606575 163 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 AC005520.5-201ENST00000613926 164 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 AC008121.3-201ENST00000618726 433 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 AC091953.5-201ENST00000622919 233 ntBASIC3.65□□□□□ -1.83
TRIM55Q9BYV6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms