Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MTND2P4-201ENST00000445034 1004 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 RNU1-123P-201ENST00000458950 160 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 FO393415.2-201ENST00000480085 343 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 RPL30P1-201ENST00000488676 339 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 LRRC34P1-201ENST00000542742 915 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 HSBP1P1-201ENST00000555205 166 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 AL359314.1-201ENST00000616913 261 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 AL132822.1-201ENST00000617063 513 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 AC091931.1-201ENST00000623488 728 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 AC008993.2-201ENST00000631744 806 ntBASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RPAP1Q9BWH6 ZNF209P-201ENST00000593450 2304 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 snoU2_19.1-201ENST00000362361 80 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 RNU6-1097P-201ENST00000363586 107 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 RNU6-944P-201ENST00000364023 107 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 RNU6-108P-201ENST00000365558 107 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 RNU6-611P-201ENST00000384276 104 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 Y_RNA.540-201ENST00000384638 111 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 RNY3P10-201ENST00000384764 102 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 USP9YP18-201ENST00000425912 695 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 AL591043.1-201ENST00000432461 424 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 AC007969.2-201ENST00000441891 191 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 RPL39P29-201ENST00000447779 157 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 RNA5SP269-201ENST00000459032 137 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 RN7SKP256-201ENST00000517201 314 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 AC060788.1-201ENST00000521318 469 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 AC004908.3-201ENST00000610248 625 ntBASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.78□□□□□ -2.12
RPAP1Q9BWH6 MTND5P35-201ENST00000557537 1720 ntBASIC1.78□□□□□ -2.13
RPAP1Q9BWH6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 RNU6-527P-201ENST00000363425 104 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 MIR1-2-201ENST00000384961 85 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 MIR454-201ENST00000390180 115 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 SNORA26.8-201ENST00000391306 124 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 BX295541.1-201ENST00000417774 250 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 AL162395.1-201ENST00000457882 422 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 RNU7-182P-201ENST00000459009 62 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 AC096745.1-201ENST00000509945 370 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 RNA5SP61-201ENST00000516453 100 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 RNU6-1178P-201ENST00000516674 107 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 SNORA18.6-201ENST00000516792 115 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 AC022616.8-201ENST00000533569 253 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 AC012414.6-201ENST00000568241 401 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 AC078795.2-201ENST00000602835 1252 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 AC064872.1-201ENST00000604823 1072 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 Z84480.1-201ENST00000605131 311 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 Z99289.3-201ENST00000605586 594 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 Z69720.2-201ENST00000624755 279 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 AC008555.8-201ENST00000623602 2168 ntBASIC1.77□□□□□ -2.13
RPAP1Q9BWH6 FGF7P2-201ENST00000332473 296 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 SNORD115-3-201ENST00000363100 82 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 Y_RNA.324-201ENST00000365165 102 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 MIR29B2-201ENST00000385055 81 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 MIR1262-201ENST00000408276 93 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 AC007098.1-201ENST00000420122 367 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 AL353689.1-201ENST00000438895 199 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 RPS29P29-201ENST00000456396 171 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 AL122001.1-201ENST00000457027 370 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 SNORD27.1-201ENST00000516319 72 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 AL109918.3-201ENST00000603072 338 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 AC245014.2-201ENST00000603689 287 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 AL136363.2-201ENST00000604173 851 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 AC246785.4-201ENST00000605374 287 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 SEPT14P19-203ENST00000633205 211 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 U4.7-201ENST00000638126 106 ntBASIC1.76□□□□□ -2.13
RPAP1Q9BWH6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.75□□□□□ -2.13
RPAP1Q9BWH6 U8.1-201ENST00000362843 134 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms