Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MIR92A1-201ENST00000385233 78 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.38□□□□□ -2.35
LIMD2Q9BT23 CYCSP33-201ENST00000414485 327 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.38□□□□□ -2.35
LIMD2Q9BT23 RAB28P5-201ENST00000427490 651 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.38□□□□□ -2.35
LIMD2Q9BT23 MTCYBP39-201ENST00000437562 491 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AL008629.1-201ENST00000438615 184 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.38□□□□□ -2.35
LIMD2Q9BT23 ATP5J2P3-201ENST00000451550 258 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 snoU13.30-201ENST00000458951 104 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 RPL39P38-201ENST00000467018 153 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AC008837.2-201ENST00000513076 418 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 RN7SKP265-201ENST00000516448 223 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 Y_RNA.687-201ENST00000516558 91 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 RN7SKP49-201ENST00000516675 260 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AP003355.1-201ENST00000518956 587 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AP000907.2-201ENST00000530827 353 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.38□□□□□ -2.35
LIMD2Q9BT23 BNIP3P8-201ENST00000597863 560 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AC008751.2-201ENST00000597885 980 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AL596327.1-201ENST00000603629 213 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 MIR3976-201ENST00000606807 139 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AL451064.1-201ENST00000607718 471 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AC124016.2-201ENST00000610058 665 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 AC024940.5-201ENST00000622889 474 ntBASIC0.38□□□□□ -2.35
LIMD2Q9BT23 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
LIMD2Q9BT23 RNU6-142P-201ENST00000384019 107 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 RNU6-110P-201ENST00000384508 104 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 AL356776.1-201ENST00000406574 447 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 HMGN1P14-201ENST00000412459 517 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 MTCO3P41-201ENST00000414801 328 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 ISCA1P6-201ENST00000427740 390 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 AC002429.1-201ENST00000437672 148 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 MTND4P15-201ENST00000437913 1033 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 AL603825.1-201ENST00000438481 80 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.37□□□□□ -2.35
LIMD2Q9BT23 PDCD5P2-201ENST00000507570 312 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 AC104806.1-201ENST00000508720 308 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 AC112206.3-201ENST00000514578 389 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.37□□□□□ -2.35
LIMD2Q9BT23 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.37□□□□□ -2.35
LIMD2Q9BT23 CYP4A27P-201ENST00000567218 190 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 MIR3973-201ENST00000579824 107 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.37□□□□□ -2.35
LIMD2Q9BT23 AC105148.1-201ENST00000604961 409 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 AC099785.1-201ENST00000605697 437 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 U6.42-201ENST00000618440 107 ntBASIC0.37□□□□□ -2.35
LIMD2Q9BT23 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.37□□□□□ -2.35
LIMD2Q9BT23 AL159152.1-201ENST00000635019 2587 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 AL589826.1-201ENST00000340697 249 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
LIMD2Q9BT23 RNU4-79P-201ENST00000362764 141 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 RNU6-384P-201ENST00000364900 104 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 RNU6-946P-201ENST00000383878 107 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 MTCYBP2-201ENST00000407745 171 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 RNU2-62P-201ENST00000410868 191 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.36□□□□□ -2.35
LIMD2Q9BT23 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.36□□□□□ -2.35
LIMD2Q9BT23 SNRPEP8-201ENST00000442866 260 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.36□□□□□ -2.35
LIMD2Q9BT23 BET1P1-201ENST00000482276 359 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 COX6CP6-201ENST00000490840 228 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 MTCO3P9-201ENST00000506989 781 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.36□□□□□ -2.35
LIMD2Q9BT23 MIR449C-201ENST00000516047 92 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 SNORA31.4-201ENST00000516049 129 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 RNA5SP168-201ENST00000516642 112 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.36□□□□□ -2.35
LIMD2Q9BT23 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.36□□□□□ -2.35
LIMD2Q9BT23 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.36□□□□□ -2.35
LIMD2Q9BT23 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.36□□□□□ -2.35
LIMD2Q9BT23 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.36□□□□□ -2.35
LIMD2Q9BT23 AC144521.1-201ENST00000607148 956 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 AL353149.1-201ENST00000610667 244 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 MIR5087-201ENST00000635826 76 ntBASIC0.36□□□□□ -2.35
LIMD2Q9BT23 OR4G1P-203ENST00000641984 1631 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 Y_RNA.191-201ENST00000363972 113 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 RNU1-96P-201ENST00000364163 162 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 SNORD31B-201ENST00000364977 69 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
LIMD2Q9BT23 SNORA32.2-201ENST00000384049 122 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 MIR605-201ENST00000385078 83 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 SNORA12.2-201ENST00000391040 156 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 RPS3AP36-201ENST00000398190 775 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.35□□□□□ -2.35
LIMD2Q9BT23 AC092809.3-201ENST00000415453 231 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 VPS26BP1-201ENST00000417155 755 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 RPS26P5-201ENST00000418544 335 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 ELOCP9-201ENST00000418624 239 ntBASIC0.35□□□□□ -2.35
LIMD2Q9BT23 AC063976.4-201ENST00000421971 163 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms