Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 RNU6-1332P-201ENST00000516666 104 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 RNU6-256P-201ENST00000516747 97 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 RNU6-1088P-201ENST00000516850 104 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTP3Q9BQQ7 AC021269.2-201ENST00000532318 330 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.54□□□□□ -2
RTP3Q9BQQ7 MIR3616-201ENST00000584070 92 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTP3Q9BQQ7 AC008121.1-201ENST00000603244 268 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 FAM157A-202ENST00000615155 405 ntBASIC2.54□□□□□ -2
RTP3Q9BQQ7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.54□□□□□ -2
RTP3Q9BQQ7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTP3Q9BQQ7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.53□□□□□ -2
RTP3Q9BQQ7 Y_RNA.166-201ENST00000363730 102 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 RNU6-1013P-201ENST00000384180 107 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.53□□□□□ -2
RTP3Q9BQQ7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.53□□□□□ -2
RTP3Q9BQQ7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.53□□□□□ -2
RTP3Q9BQQ7 RNU7-138P-201ENST00000459479 64 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 AC008571.1-201ENST00000467232 300 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.53□□□□□ -2
RTP3Q9BQQ7 TRBVA-201ENST00000498804 316 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 AC103851.1-201ENST00000506833 274 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.53□□□□□ -2
RTP3Q9BQQ7 AC107222.1-201ENST00000510899 637 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 SNORA43.2-201ENST00000516652 128 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 ACA59.2-201ENST00000517061 156 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 AC087854.1-201ENST00000519706 414 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 AP004607.1-201ENST00000524456 203 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 COX6CP5-201ENST00000527162 228 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 AP000889.2-201ENST00000532684 490 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.53□□□□□ -2
RTP3Q9BQQ7 AC025423.5-201ENST00000550230 219 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 AC005668.1-201ENST00000571142 476 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 AC007151.1-201ENST00000572774 483 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 MIR3670-2-201ENST00000582974 65 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 MIR3670-1-201ENST00000584160 65 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 MIR3670-3-201ENST00000584855 65 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 MIR3670-4-201ENST00000612260 65 ntBASIC2.53□□□□□ -2
RTP3Q9BQQ7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RTP3Q9BQQ7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RTP3Q9BQQ7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.53□□□□□ -2.01
RTP3Q9BQQ7 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.53□□□□□ -2.01
RTP3Q9BQQ7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.53□□□□□ -2.01
RTP3Q9BQQ7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.53□□□□□ -2.01
RTP3Q9BQQ7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 SNORA68.1-201ENST00000364537 132 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AL356432.1-201ENST00000405809 419 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AL365400.1-201ENST00000431854 640 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AC093019.1-201ENST00000443135 252 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 MRPL42P6-201ENST00000486397 371 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 RNA5SP281-201ENST00000516504 135 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AP005597.4-201ENST00000526762 229 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 OR1M4P-201ENST00000589199 287 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AC243960.4-201ENST00000600532 288 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AL391813.1-201ENST00000603098 260 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AL670379.10-201ENST00000604330 253 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AL670379.9-201ENST00000605428 253 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 LARP7P1-201ENST00000605576 316 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AC067747.1-201ENST00000608026 250 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AC025253.1-201ENST00000613623 543 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AL449363.1-201ENST00000617815 186 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AC138627.2-201ENST00000624202 601 ntBASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RTP3Q9BQQ7 MTND5P6-201ENST00000422338 1798 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 MIR21-201ENST00000362134 72 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 RNU6-78P-201ENST00000362897 107 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 Y_RNA.184-201ENST00000363884 108 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 RNU5E-7P-201ENST00000365290 117 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 SNORA41-201ENST00000384675 132 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 RNU6-19P-201ENST00000384718 107 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 SNORD73A-201ENST00000386062 65 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 PTGES3P4-201ENST00000426243 356 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 AC018634.1-201ENST00000437554 401 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 AC009296.1-201ENST00000443146 155 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 MTND1P11-201ENST00000456661 876 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 MTCYBP40-201ENST00000509390 1135 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 Y_RNA.682-201ENST00000516457 100 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 HSPE1P18-201ENST00000517602 280 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 GLYCAM1-201ENST00000546596 285 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 CR383656.8-201ENST00000549046 145 ntBASIC2.51□□□□□ -2.01
RTP3Q9BQQ7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms