Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.04□□□□□ -2.4
ABCA3Q99758 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.04□□□□□ -2.4
ABCA3Q99758 AC107304.1-201ENST00000604229 296 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 AC096586.1-201ENST00000610267 561 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 AC092106.3-201ENST00000611308 722 ntBASIC0.04□□□□□ -2.4
ABCA3Q99758 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.04□□□□□ -2.4
ABCA3Q99758 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.03□□□□□ -2.4
ABCA3Q99758 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.03□□□□□ -2.4
ABCA3Q99758 RNU6-898P-201ENST00000365627 104 ntBASIC0.03□□□□□ -2.4
ABCA3Q99758 RNU6-637P-201ENST00000384050 107 ntBASIC0.03□□□□□ -2.4
ABCA3Q99758 MIR29B2-201ENST00000385055 81 ntBASIC0.03□□□□□ -2.4
ABCA3Q99758 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.03□□□□□ -2.4
ABCA3Q99758 ISCA1P1-201ENST00000426679 387 ntBASIC0.03□□□□□ -2.4
ABCA3Q99758 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.03□□□□□ -2.4
ABCA3Q99758 AC245047.7-201ENST00000440265 293 ntBASIC0.03□□□□□ -2.4
ABCA3Q99758 MTND1P9-201ENST00000453775 944 ntBASIC0.03□□□□□ -2.4
ABCA3Q99758 AC233266.1-201ENST00000454518 96 ntBASIC0.03□□□□□ -2.4
ABCA3Q99758 AL162395.1-201ENST00000457882 422 ntBASIC0.03□□□□□ -2.4
ABCA3Q99758 RNU6-390P-201ENST00000516259 103 ntBASIC0.03□□□□□ -2.4
ABCA3Q99758 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.03□□□□□ -2.4
ABCA3Q99758 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.03□□□□□ -2.4
ABCA3Q99758 AC242852.1-201ENST00000612151 96 ntBASIC0.03□□□□□ -2.4
ABCA3Q99758 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.03□□□□□ -2.4
ABCA3Q99758 AC009268.2-201ENST00000621925 457 ntBASIC0.03□□□□□ -2.4
ABCA3Q99758 AC244015.1-201ENST00000622301 99 ntBASIC0.03□□□□□ -2.4
ABCA3Q99758 RNU6-1167P-201ENST00000363227 94 ntBASIC0.02□□□□□ -2.41
ABCA3Q99758 RNU2-28P-201ENST00000410457 189 ntBASIC0.02□□□□□ -2.41
ABCA3Q99758 RNA5SP111-201ENST00000411386 101 ntBASIC0.02□□□□□ -2.41
ABCA3Q99758 UBE2V1P11-201ENST00000411559 285 ntBASIC0.02□□□□□ -2.41
ABCA3Q99758 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.02□□□□□ -2.41
ABCA3Q99758 RNU1-131P-201ENST00000458943 161 ntBASIC0.02□□□□□ -2.41
ABCA3Q99758 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.02□□□□□ -2.41
ABCA3Q99758 RPL23AP54-201ENST00000495129 419 ntBASIC0.02□□□□□ -2.41
ABCA3Q99758 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.02□□□□□ -2.41
ABCA3Q99758 SNORA31.2-201ENST00000516019 134 ntBASIC0.02□□□□□ -2.41
ABCA3Q99758 SUMO2P16-201ENST00000519475 264 ntBASIC0.02□□□□□ -2.41
ABCA3Q99758 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.02□□□□□ -2.41
ABCA3Q99758 MIR4645-201ENST00000583158 77 ntBASIC0.02□□□□□ -2.41
ABCA3Q99758 AL590240.4-201ENST00000616908 390 ntBASIC0.02□□□□□ -2.41
ABCA3Q99758 DHFRP6-201ENST00000401776 268 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 CBX3P9-201ENST00000402326 552 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 AL357139.1-201ENST00000407792 426 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 Y_RNA.597-201ENST00000410463 100 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 RPS27AP8-201ENST00000452665 445 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 BTF3P15-201ENST00000455606 336 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.01□□□□□ -2.41
ABCA3Q99758 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.01□□□□□ -2.41
ABCA3Q99758 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.01□□□□□ -2.41
ABCA3Q99758 AC126365.2-201ENST00000580630 379 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 SNORD3E-201ENST00000362899 217 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 SNORD116-23-201ENST00000384645 92 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 AC011005.2-201ENST00000487324 359 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 AC097473.1-201ENST00000508142 408 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 AC024589.1-201ENST00000512207 263 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 AC141557.1-201ENST00000540982 400 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 AL442163.3-201ENST00000554110 156 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.01□□□□□ -2.41
ABCA3Q99758 MIR1248-201ENST00000629190 106 ntBASIC0.01□□□□□ -2.41
ABCA3Q99758 RNU6-252P-201ENST00000363232 107 ntBASIC0□□□□□ -2.41
ABCA3Q99758 RNU1-39P-201ENST00000383897 165 ntBASIC0□□□□□ -2.41
ABCA3Q99758 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0□□□□□ -2.41
ABCA3Q99758 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0□□□□□ -2.41
ABCA3Q99758 HMGN2P22-201ENST00000427588 175 ntBASIC0□□□□□ -2.41
ABCA3Q99758 FABP5P4-201ENST00000437203 171 ntBASIC0□□□□□ -2.41
ABCA3Q99758 MTCO2P25-201ENST00000447065 681 ntBASIC0□□□□□ -2.41
ABCA3Q99758 VN1R10P-201ENST00000447106 875 ntBASIC0□□□□□ -2.41
ABCA3Q99758 AL031313.1-201ENST00000448435 256 ntBASIC0□□□□□ -2.41
ABCA3Q99758 AC104982.1-201ENST00000478775 574 ntBASIC0□□□□□ -2.41
ABCA3Q99758 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0□□□□□ -2.41
ABCA3Q99758 Z98751.3-201ENST00000604447 521 ntBASIC0□□□□□ -2.41
ABCA3Q99758 AL596245.1-201ENST00000618994 362 ntBASIC0□□□□□ -2.41
ABCA3Q99758 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0□□□□□ -2.41
ABCA3Q99758 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0□□□□□ -2.41
ABCA3Q99758 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 U3.9-201ENST00000363823 204 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 RNU6-945P-201ENST00000383947 107 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 SNORD89-201ENST00000390981 114 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 TXNL1P1-201ENST00000429528 554 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 AC016717.1-201ENST00000448918 286 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.01□□□□□ -2.41
ABCA3Q99758 snoU13.30-201ENST00000458951 104 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.01□□□□□ -2.41
ABCA3Q99758 AC011406.1-201ENST00000512440 370 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 AL356057.1-201ENST00000533798 831 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.01□□□□□ -2.41
ABCA3Q99758 AP001981.2-201ENST00000603241 418 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.01□□□□□ -2.41
ABCA3Q99758 AC068647.2-201ENST00000637380 353 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 SNORA80D-201ENST00000384488 135 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 AC019178.2-201ENST00000423595 505 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.01□□□□□ -2.41
ABCA3Q99758 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC-0.01□□□□□ -2.41
ABCA3Q99758 RPL37P6-201ENST00000460682 294 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 AC009646.1-201ENST00000510455 318 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 RNU6-927P-201ENST00000516199 100 ntBASIC-0.01□□□□□ -2.41
ABCA3Q99758 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.01□□□□□ -2.41
ABCA3Q99758 AC093027.1-201ENST00000546698 429 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms