Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNU2-20P-201ENST00000410425 191 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.05□□□□□ -1.92
TIMP4Q99727 AL591043.1-201ENST00000432461 424 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 NDUFB4P6-201ENST00000436819 366 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.05□□□□□ -1.92
TIMP4Q99727 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.05□□□□□ -1.92
TIMP4Q99727 AL513124.1-201ENST00000450410 614 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.05□□□□□ -1.92
TIMP4Q99727 AC067942.3-201ENST00000512025 362 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 RNU6-703P-201ENST00000516946 107 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 RNU6-111P-201ENST00000517179 105 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 AC093023.1-201ENST00000547375 507 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.05□□□□□ -1.92
TIMP4Q99727 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.05□□□□□ -1.92
TIMP4Q99727 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.05□□□□□ -1.92
TIMP4Q99727 AC243829.7-201ENST00000633081 225 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 U6.92-201ENST00000636464 89 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.05□□□□□ -1.92
TIMP4Q99727 Z83843.1-201ENST00000604070 3685 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 AL136164.4-201ENST00000625013 2135 ntBASIC3.05□□□□□ -1.92
TIMP4Q99727 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
TIMP4Q99727 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
TIMP4Q99727 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TIMP4Q99727 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TIMP4Q99727 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
TIMP4Q99727 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TIMP4Q99727 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
TIMP4Q99727 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TIMP4Q99727 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
TIMP4Q99727 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.04□□□□□ -1.92
TIMP4Q99727 Y_RNA.84-201ENST00000363011 104 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 Y_RNA.143-201ENST00000363520 106 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 RNU6-884P-201ENST00000363889 107 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 RNU6-968P-201ENST00000384076 107 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
TIMP4Q99727 AP000275.1-201ENST00000411943 390 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 AC126124.2-201ENST00000413542 321 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 MTND5P15-201ENST00000434246 349 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 AL353705.4-201ENST00000449661 238 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 SSXP4-201ENST00000451349 245 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 SUMO1P2-201ENST00000452524 304 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 HMGN1P18-201ENST00000457642 277 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 snoU13.30-201ENST00000458951 104 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 SNRPGP7-201ENST00000469016 106 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 RPL30P5-201ENST00000494923 336 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.04□□□□□ -1.92
TIMP4Q99727 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.04□□□□□ -1.92
TIMP4Q99727 RNU1-143P-201ENST00000516296 146 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 AC022868.1-201ENST00000517767 391 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.04□□□□□ -1.92
TIMP4Q99727 AP004607.1-201ENST00000524456 203 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.04□□□□□ -1.92
TIMP4Q99727 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.04□□□□□ -1.92
TIMP4Q99727 MIR3186-201ENST00000577404 85 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 MIR4276-201ENST00000584832 70 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 AC010928.2-201ENST00000588017 287 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 AC010900.2-201ENST00000604508 210 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.04□□□□□ -1.92
TIMP4Q99727 U1.23-201ENST00000610293 146 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 RNU1-68P-201ENST00000615382 146 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 U1.39-201ENST00000621562 146 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.04□□□□□ -1.92
TIMP4Q99727 MIR3651-201ENST00000630427 90 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 AC002546.1-201ENST00000588041 2504 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.04□□□□□ -1.92
TIMP4Q99727 AC118273.1-201ENST00000525324 3006 ntBASIC3.04□□□□□ -1.92
TIMP4Q99727 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
TIMP4Q99727 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TIMP4Q99727 SRP72P2-201ENST00000344851 1979 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.03□□□□□ -1.92
TIMP4Q99727 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TIMP4Q99727 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
TIMP4Q99727 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.03□□□□□ -1.92
TIMP4Q99727 RNU6-222P-201ENST00000362438 107 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 SNORD56.3-201ENST00000363507 71 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 RNU4-9P-201ENST00000364951 139 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 RNU6-217P-201ENST00000384164 104 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TIMP4Q99727 EI24P2-201ENST00000397776 1076 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 RNU6-1203P-201ENST00000410703 110 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.03□□□□□ -1.92
TIMP4Q99727 HMGN2P30-201ENST00000423237 256 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 AC096920.1-201ENST00000423991 241 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 SDAD1P3-201ENST00000427380 333 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 CYCSP32-201ENST00000440548 321 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 AC098831.1-201ENST00000440661 216 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 AC009296.1-201ENST00000443146 155 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 AC125238.1-201ENST00000448842 249 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 RPL23AP75-201ENST00000491601 451 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 ANXA2P1-201ENST00000505539 926 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 AC025465.3-201ENST00000510570 311 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 RNU6-1282P-201ENST00000516735 96 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 DEFB108E-201ENST00000524692 240 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 AC023824.2-201ENST00000566185 400 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 MIR3200-201ENST00000580767 85 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 AC024153.1-201ENST00000603103 365 ntBASIC3.03□□□□□ -1.92
TIMP4Q99727 YPEL5P2-201ENST00000605553 359 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms