Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RNU2-7P-201ENST00000410794 178 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 AP000275.1-201ENST00000411943 390 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 MTCO3P41-201ENST00000414801 328 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 AC114491.1-201ENST00000416095 246 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.85□□□□□ -2.27
CCL13Q99616 CST2P1-201ENST00000425770 87 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 RPL22P17-201ENST00000438729 315 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.85□□□□□ -2.27
CCL13Q99616 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.85□□□□□ -2.27
CCL13Q99616 MTND3P5-201ENST00000512798 333 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 AC116347.2-201ENST00000514912 523 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 AP002453.2-201ENST00000533503 320 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.85□□□□□ -2.27
CCL13Q99616 CYP3A52P-201ENST00000563326 91 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 AC015688.6-201ENST00000577737 104 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 AP003465.2-201ENST00000602571 373 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 AL034555.1-201ENST00000604816 211 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 AC104073.3-201ENST00000610942 955 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 AL133216.2-202ENST00000634512 349 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 AC103706.2-201ENST00000638080 240 ntBASIC0.85□□□□□ -2.27
CCL13Q99616 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CCL13Q99616 MTND5P35-201ENST00000557537 1720 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 RNU6-1285P-201ENST00000363480 105 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 RNU6-371P-201ENST00000364283 108 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 AL161935.2-201ENST00000414627 60 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 SNRPEP8-201ENST00000442866 260 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 RPS29P28-201ENST00000446439 141 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 RNU7-40P-201ENST00000516397 64 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 SNORD60.2-201ENST00000516883 86 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 RNA5SP337-201ENST00000517007 109 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 AC105185.1-201ENST00000518705 535 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.84□□□□□ -2.27
CCL13Q99616 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.84□□□□□ -2.27
CCL13Q99616 BNIP3P40-201ENST00000596017 556 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 AC069431.2-201ENST00000604149 1099 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 AC069114.2-201ENST00000604699 304 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 AC097372.5-201ENST00000623665 376 ntBASIC0.84□□□□□ -2.27
CCL13Q99616 AC010615.1-201ENST00000594254 1764 ntBASIC0.83□□□□□ -2.28
CCL13Q99616 Y_RNA.4-201ENST00000362333 112 ntBASIC0.83□□□□□ -2.28
CCL13Q99616 RNU4-38P-201ENST00000364472 129 ntBASIC0.83□□□□□ -2.28
CCL13Q99616 RNU6-1065P-201ENST00000384513 106 ntBASIC0.83□□□□□ -2.28
CCL13Q99616 RPL21P90-201ENST00000415692 466 ntBASIC0.83□□□□□ -2.28
CCL13Q99616 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.83□□□□□ -2.28
CCL13Q99616 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.83□□□□□ -2.28
CCL13Q99616 ISCA1P6-201ENST00000427740 390 ntBASIC0.83□□□□□ -2.28
CCL13Q99616 AC245047.4-201ENST00000433189 144 ntBASIC0.83□□□□□ -2.28
CCL13Q99616 RPS23P4-201ENST00000487908 423 ntBASIC0.83□□□□□ -2.28
CCL13Q99616 AC022447.4-201ENST00000504053 364 ntBASIC0.83□□□□□ -2.28
CCL13Q99616 AC104806.1-201ENST00000508720 308 ntBASIC0.83□□□□□ -2.28
CCL13Q99616 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.83□□□□□ -2.28
CCL13Q99616 RNU5A-4P-201ENST00000516588 111 ntBASIC0.83□□□□□ -2.28
CCL13Q99616 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.83□□□□□ -2.28
CCL13Q99616 MIR5697-201ENST00000578045 78 ntBASIC0.83□□□□□ -2.28
CCL13Q99616 AL590229.1-201ENST00000603497 542 ntBASIC0.83□□□□□ -2.28
CCL13Q99616 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.83□□□□□ -2.28
CCL13Q99616 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CCL13Q99616 AC004808.1-201ENST00000627671 721 ntBASIC0.83□□□□□ -2.28
CCL13Q99616 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CCL13Q99616 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.83□□□□□ -2.28
CCL13Q99616 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CCL13Q99616 Y_RNA.97-201ENST00000363094 102 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 RNU6-931P-201ENST00000363850 107 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 Y_RNA.302-201ENST00000364997 102 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 RNU6-438P-201ENST00000365561 103 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 RNU6-142P-201ENST00000384019 107 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 SNORA70.7-201ENST00000384159 133 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 EEF1A1P40-201ENST00000412883 573 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 AC099677.2-201ENST00000436385 175 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.82□□□□□ -2.28
CCL13Q99616 snoU13.30-201ENST00000458951 104 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 AL049829.1-201ENST00000465411 156 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 ATP5EP1-201ENST00000510257 156 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 AC079140.3-201ENST00000511111 550 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 RNA5SP481-201ENST00000516814 122 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.82□□□□□ -2.28
CCL13Q99616 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.82□□□□□ -2.28
CCL13Q99616 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 MIR8065-201ENST00000620577 100 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 SNORD98-201ENST00000636377 67 ntBASIC0.82□□□□□ -2.28
CCL13Q99616 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CCL13Q99616 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.81□□□□□ -2.28
CCL13Q99616 RNU6-809P-201ENST00000384461 107 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 RNA5SP111-201ENST00000411386 101 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.81□□□□□ -2.28
CCL13Q99616 C1DP2-201ENST00000418167 426 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.81□□□□□ -2.28
CCL13Q99616 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.81□□□□□ -2.28
CCL13Q99616 MTCYBP39-201ENST00000437562 491 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 DYNLT3P2-201ENST00000442517 295 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 USP9YP25-201ENST00000457708 443 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 ARL2BPP4-201ENST00000506854 471 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 AF131216.2-201ENST00000512316 564 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 RNA5SP102-201ENST00000516865 106 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 RNA5SP404-201ENST00000517118 132 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.81□□□□□ -2.28
CCL13Q99616 AC087883.1-201ENST00000551882 391 ntBASIC0.81□□□□□ -2.28
CCL13Q99616 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.81□□□□□ -2.28
CCL13Q99616 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms