Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NUP88Q99567 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.31□□□□□ -1.88
NUP88Q99567 RNA5SP112-201ENST00000515937 99 ntBASIC3.31□□□□□ -1.88
NUP88Q99567 RNU6-307P-201ENST00000516743 106 ntBASIC3.31□□□□□ -1.88
NUP88Q99567 Y_RNA.718-201ENST00000517110 102 ntBASIC3.31□□□□□ -1.88
NUP88Q99567 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP88Q99567 GLYCAM1-201ENST00000546596 285 ntBASIC3.31□□□□□ -1.88
NUP88Q99567 MIR4513-201ENST00000581077 86 ntBASIC3.31□□□□□ -1.88
NUP88Q99567 Z75746.1-201ENST00000440243 2080 ntBASIC3.31□□□□□ -1.88
NUP88Q99567 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NUP88Q99567 AC062016.1-201ENST00000355719 319 ntBASIC3.3□□□□□ -1.88
NUP88Q99567 MIR449A-201ENST00000362113 91 ntBASIC3.3□□□□□ -1.88
NUP88Q99567 RNU1-112P-201ENST00000364401 164 ntBASIC3.3□□□□□ -1.88
NUP88Q99567 RNU2-52P-201ENST00000410680 190 ntBASIC3.3□□□□□ -1.88
NUP88Q99567 USMG5P1-201ENST00000425964 177 ntBASIC3.3□□□□□ -1.88
NUP88Q99567 RPL23AP58-201ENST00000440453 469 ntBASIC3.3□□□□□ -1.88
NUP88Q99567 AL031659.1-201ENST00000447075 539 ntBASIC3.3□□□□□ -1.88
NUP88Q99567 RPS29P27-201ENST00000463711 170 ntBASIC3.3□□□□□ -1.88
NUP88Q99567 RPS26P21-201ENST00000475397 348 ntBASIC3.3□□□□□ -1.88
NUP88Q99567 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP88Q99567 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP88Q99567 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.3□□□□□ -1.88
NUP88Q99567 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.3□□□□□ -1.88
NUP88Q99567 HMGB1P24-202ENST00000615653 685 ntBASIC3.3□□□□□ -1.88
NUP88Q99567 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.3□□□□□ -1.88
NUP88Q99567 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
NUP88Q99567 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NUP88Q99567 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.29□□□□□ -1.88
NUP88Q99567 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NUP88Q99567 AC006026.1-201ENST00000444025 1803 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 Y_RNA.404-201ENST00000383978 102 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 Y_RNA.419-201ENST00000384041 102 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 RNU6-842P-201ENST00000384269 107 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 SNORD116-29-201ENST00000384516 83 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 RNU6-310P-201ENST00000384655 107 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 AL591034.2-201ENST00000402839 359 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 AC097463.2-201ENST00000421074 142 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 NUP35P1-201ENST00000422734 947 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 MTND4P28-201ENST00000426217 387 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.29□□□□□ -1.88
NUP88Q99567 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.29□□□□□ -1.88
NUP88Q99567 AL109933.2-201ENST00000452651 260 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.29□□□□□ -1.88
NUP88Q99567 AC091179.1-201ENST00000461606 579 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 HMGN1P13-201ENST00000505795 138 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 SCARNA11.3-201ENST00000517276 130 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.29□□□□□ -1.88
NUP88Q99567 AC107016.2-201ENST00000547968 190 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.29□□□□□ -1.88
NUP88Q99567 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.29□□□□□ -1.88
NUP88Q99567 AC092608.2-201ENST00000624427 218 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.29□□□□□ -1.88
NUP88Q99567 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.29□□□□□ -1.88
NUP88Q99567 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
NUP88Q99567 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.28□□□□□ -1.88
NUP88Q99567 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NUP88Q99567 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.28□□□□□ -1.88
NUP88Q99567 MTND5P9-201ENST00000503854 1755 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NUP88Q99567 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NUP88Q99567 Y_RNA.48-201ENST00000362710 103 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 RNU6-1141P-201ENST00000364520 107 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 RNU6-142P-201ENST00000384019 107 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 RNU6-331P-201ENST00000384724 107 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 RNU2-23P-201ENST00000410545 195 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 Y_RNA.646-201ENST00000410980 101 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.28□□□□□ -1.88
NUP88Q99567 GPM6BP3-201ENST00000442797 145 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 AC104564.1-201ENST00000493028 407 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 AC016632.1-201ENST00000503994 196 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 AC091874.1-201ENST00000511402 339 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 SCARNA16.2-201ENST00000516520 172 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.28□□□□□ -1.88
NUP88Q99567 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NUP88Q99567 AC010620.2-201ENST00000600135 313 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 AL133255.1-201ENST00000606374 441 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 AL359198.2-201ENST00000611836 194 ntBASIC3.28□□□□□ -1.88
NUP88Q99567 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NUP88Q99567 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.28□□□□□ -1.89
NUP88Q99567 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP88Q99567 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NUP88Q99567 OR56A5-201ENST00000340110 738 ntBASIC3.27□□□□□ -1.89
NUP88Q99567 RNU6-1010P-201ENST00000362757 107 ntBASIC3.27□□□□□ -1.89
NUP88Q99567 RNU6-486P-201ENST00000363116 107 ntBASIC3.27□□□□□ -1.89
NUP88Q99567 RNU6-968P-201ENST00000384076 107 ntBASIC3.27□□□□□ -1.89
NUP88Q99567 MIR218-1-201ENST00000384999 110 ntBASIC3.27□□□□□ -1.89
NUP88Q99567 AL512633.1-201ENST00000399931 655 ntBASIC3.27□□□□□ -1.89
NUP88Q99567 RPS20P15-201ENST00000412792 311 ntBASIC3.27□□□□□ -1.89
NUP88Q99567 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP88Q99567 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.27□□□□□ -1.89
NUP88Q99567 EIF1AXP1-201ENST00000419267 435 ntBASIC3.27□□□□□ -1.89
NUP88Q99567 BX276092.3-201ENST00000424182 230 ntBASIC3.27□□□□□ -1.89
NUP88Q99567 SAR1AP4-201ENST00000429225 591 ntBASIC3.27□□□□□ -1.89
NUP88Q99567 AC244670.1-201ENST00000436879 112 ntBASIC3.27□□□□□ -1.89
NUP88Q99567 UBE2V1P7-201ENST00000446395 340 ntBASIC3.27□□□□□ -1.89
NUP88Q99567 MTCO3P10-201ENST00000455912 772 ntBASIC3.27□□□□□ -1.89
NUP88Q99567 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.27□□□□□ -1.89
NUP88Q99567 SNORD109B-201ENST00000458961 67 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms