Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 Y_RNA.44-201ENST00000362676 108 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-290P-201ENST00000365212 101 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 RNVU1-14-201ENST00000384770 164 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 snoU13.24-201ENST00000458998 104 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 snoU13.22-201ENST00000459428 104 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 U8.21-201ENST00000459536 136 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 AC008155.2-201ENST00000464337 397 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 AC091153.1-201ENST00000466297 402 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 RPL21P13-201ENST00000488305 481 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 AK3P2-201ENST00000507976 429 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU1-61P-201ENST00000516107 151 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 RN7SKP272-201ENST00000516988 232 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 AC109479.2-201ENST00000517842 174 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 AC107934.2-201ENST00000518653 310 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 CASP1P1-201ENST00000526345 212 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 MRPS36P4-201ENST00000534436 298 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 MIR1273C-201ENST00000578669 77 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 MIR4738-201ENST00000579134 87 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 MIR3144-201ENST00000579460 79 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 Y_RNA.772-201ENST00000606692 102 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 AL161629.2-201ENST00000615347 275 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 BX322639.1-202ENST00000423987 2213 ntBASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
CDK5RAP1Q96SZ6 AC007785.2-201ENST00000598627 1916 ntBASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 AL513302.2-201ENST00000562313 1842 ntBASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-1301P-201ENST00000362724 104 ntBASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-1020P-201ENST00000363684 107 ntBASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 SNORD14B-201ENST00000364533 90 ntBASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 Y_RNA.418-201ENST00000384029 102 ntBASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 TOMM22P1-201ENST00000418578 312 ntBASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 AL591043.1-201ENST00000432461 424 ntBASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 SNORA31.18-201ENST00000517043 134 ntBASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 BDH2P1-201ENST00000602288 736 ntBASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 AC096577.2-201ENST00000611455 153 ntBASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 OR4G2P-202ENST00000641004 1759 ntBASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 AC118273.1-201ENST00000525324 3006 ntBASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDK5RAP1Q96SZ6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 AC073073.2-201ENST00000609827 2578 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 Y_RNA.33-201ENST00000362591 102 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 Y_RNA.81-201ENST00000362997 102 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 SNORA70.4-201ENST00000365509 134 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 EI24P2-201ENST00000397776 1076 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 RNA5SP129-201ENST00000410276 118 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 AC126124.2-201ENST00000413542 321 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 MTATP6P4-201ENST00000427725 675 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 RPS26P21-201ENST00000475397 348 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 ANXA2P1-201ENST00000505539 926 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 SEPT14P8-201ENST00000508026 178 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 Y_RNA.662-201ENST00000516028 97 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 RNA5SP468-201ENST00000516782 93 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 AC025755.1-201ENST00000521306 278 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 MIR4425-201ENST00000580572 84 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 AC010928.2-201ENST00000588017 287 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 Z83818.1-201ENST00000603584 150 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 AL161798.1-201ENST00000604630 131 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 AC073346.2-201ENST00000624724 2058 ntBASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDK5RAP1Q96SZ6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-50P-201ENST00000362356 103 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-81P-201ENST00000365608 104 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 RNY1P5-201ENST00000383890 115 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-1081P-201ENST00000384537 107 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 MIR10A-201ENST00000385043 110 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-918P-201ENST00000391219 106 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-735P-201ENST00000410612 107 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 RNU6-1135P-201ENST00000411083 103 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 RPL21P40-201ENST00000428586 483 ntBASIC3.5□□□□□ -1.85
CDK5RAP1Q96SZ6 AC005326.1-201ENST00000429197 123 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms