Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 AC016957.1-201ENST00000534895 309 ntBASIC0.59□□□□□ -2.31
LYSMD1Q96S90 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
LYSMD1Q96S90 RNU6-87P-201ENST00000607561 108 ntBASIC0.59□□□□□ -2.31
LYSMD1Q96S90 AL355816.2-201ENST00000610049 647 ntBASIC0.59□□□□□ -2.31
LYSMD1Q96S90 SCARNA4-202ENST00000625402 129 ntBASIC0.59□□□□□ -2.31
LYSMD1Q96S90 OR4G2P-201ENST00000328113 903 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 MIR412-201ENST00000362142 91 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 SNORA63D-201ENST00000364359 132 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 RNU6-1-201ENST00000383898 107 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 RNU6-42P-201ENST00000384165 107 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 RNU6-36P-201ENST00000384172 107 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 RNU6-4P-201ENST00000384205 107 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 RNU6-5P-201ENST00000384238 107 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 RNU6-3P-201ENST00000384314 107 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 RNU6-2-201ENST00000384627 107 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 RNU6-9-201ENST00000384776 107 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 RNU6-33P-201ENST00000384793 107 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 SNORA40.2-201ENST00000390847 128 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.58□□□□□ -2.32
LYSMD1Q96S90 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.58□□□□□ -2.32
LYSMD1Q96S90 NDUFA5P4-201ENST00000436704 385 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 MTND1P30-201ENST00000441241 901 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.58□□□□□ -2.32
LYSMD1Q96S90 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.58□□□□□ -2.32
LYSMD1Q96S90 RN7SKP49-201ENST00000516675 260 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.58□□□□□ -2.32
LYSMD1Q96S90 AC107304.1-201ENST00000604229 296 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 RNU6-6P-201ENST00000606623 107 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 AL354696.1-201ENST00000614652 497 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 AC022709.1-201ENST00000615967 87 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 AC068647.2-201ENST00000637380 353 ntBASIC0.58□□□□□ -2.32
LYSMD1Q96S90 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
LYSMD1Q96S90 AL589826.1-201ENST00000340697 249 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 SNORD56.1-201ENST00000362913 68 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 Y_RNA.796-201ENST00000364268 102 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 RNU6-1019P-201ENST00000364424 107 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 Y_RNA.799-201ENST00000364992 102 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 Y_RNA.354-201ENST00000365448 111 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 SMIM11P1-201ENST00000369586 178 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 RNU6-190P-201ENST00000384154 102 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 MIR10A-201ENST00000385043 110 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 RNU6-1176P-201ENST00000390955 107 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 RAP1BP3-201ENST00000407180 549 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 BTF3L4P1-201ENST00000413813 468 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 MTND4P3-201ENST00000417829 541 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 AC010099.3-201ENST00000423896 409 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 AL117351.1-201ENST00000438864 766 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 MTCO2P25-201ENST00000447065 681 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 MTCO1P27-201ENST00000448269 226 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 snoU13.27-201ENST00000459278 104 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 MTCO3P27-201ENST00000514397 196 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 RNU6-197P-201ENST00000516680 100 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 SNORA70.22-201ENST00000517160 124 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 RNU6-1028P-201ENST00000517164 93 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 AP003355.1-201ENST00000518956 587 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.57□□□□□ -2.32
LYSMD1Q96S90 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.57□□□□□ -2.32
LYSMD1Q96S90 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.57□□□□□ -2.32
LYSMD1Q96S90 AC091135.1-201ENST00000585943 307 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 MTCO2P2-201ENST00000591258 225 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 AL136363.2-201ENST00000604173 851 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 MIR15A-201ENST00000607334 83 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 AC131235.4-201ENST00000609288 620 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 AC040896.1-201ENST00000613819 479 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.57□□□□□ -2.32
LYSMD1Q96S90 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.57□□□□□ -2.32
LYSMD1Q96S90 Y_RNA.122-201ENST00000363331 96 ntBASIC0.56□□□□□ -2.32
LYSMD1Q96S90 SNORD32B-201ENST00000364460 84 ntBASIC0.56□□□□□ -2.32
LYSMD1Q96S90 RNU1-133P-201ENST00000364867 167 ntBASIC0.56□□□□□ -2.32
LYSMD1Q96S90 MIR608-201ENST00000384820 100 ntBASIC0.56□□□□□ -2.32
LYSMD1Q96S90 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
LYSMD1Q96S90 AC099677.2-201ENST00000436385 175 ntBASIC0.56□□□□□ -2.32
LYSMD1Q96S90 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.56□□□□□ -2.32
LYSMD1Q96S90 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.56□□□□□ -2.32
LYSMD1Q96S90 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.56□□□□□ -2.32
LYSMD1Q96S90 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.56□□□□□ -2.32
LYSMD1Q96S90 TRBVA-201ENST00000498804 316 ntBASIC0.56□□□□□ -2.32
LYSMD1Q96S90 RNU6-322P-201ENST00000516010 103 ntBASIC0.56□□□□□ -2.32
LYSMD1Q96S90 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.56□□□□□ -2.32
LYSMD1Q96S90 AL353778.1-201ENST00000603149 408 ntBASIC0.56□□□□□ -2.32
LYSMD1Q96S90 MTATP6P2-201ENST00000603319 678 ntBASIC0.56□□□□□ -2.32
LYSMD1Q96S90 AC245297.2-201ENST00000610119 565 ntBASIC0.56□□□□□ -2.32
LYSMD1Q96S90 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.56□□□□□ -2.32
LYSMD1Q96S90 MIR6734-201ENST00000621166 68 ntBASIC0.56□□□□□ -2.32
LYSMD1Q96S90 AC024940.5-201ENST00000622889 474 ntBASIC0.56□□□□□ -2.32
LYSMD1Q96S90 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
LYSMD1Q96S90 MIR340-201ENST00000362125 95 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 SNORD114-24-201ENST00000365029 72 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 SNORA12-201ENST00000391162 147 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 RPS3AP36-201ENST00000398190 775 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.55□□□□□ -2.32
LYSMD1Q96S90 AL591043.1-201ENST00000432461 424 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 RPS25P9-201ENST00000435591 252 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.55□□□□□ -2.32
LYSMD1Q96S90 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.55□□□□□ -2.32
LYSMD1Q96S90 NDUFB1P2-201ENST00000449477 176 ntBASIC0.55□□□□□ -2.32
LYSMD1Q96S90 AL122001.1-201ENST00000457027 370 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms