Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 RNU2-3P-201ENST00000410144 191 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.37□□□□□ -2.19
C9orf72Q96LT7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.37□□□□□ -2.19
C9orf72Q96LT7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.37□□□□□ -2.19
C9orf72Q96LT7 MTND4P20-201ENST00000424125 869 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 HSFY7P-201ENST00000432672 318 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.37□□□□□ -2.19
C9orf72Q96LT7 HSFY8P-201ENST00000437934 318 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 HMGN2P18-201ENST00000450680 270 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 HSFY5P-201ENST00000453726 309 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 SNRPFP4-201ENST00000456366 242 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 RPS29P29-201ENST00000456396 171 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 AC112492.4-201ENST00000456549 352 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.37□□□□□ -2.19
C9orf72Q96LT7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 SNRPGP7-201ENST00000469016 106 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 AC010409.1-201ENST00000487382 476 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 AC145146.1-201ENST00000496370 254 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 MTND3P5-201ENST00000512798 333 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 SCARNA24.1-201ENST00000516465 137 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.37□□□□□ -2.19
C9orf72Q96LT7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.37□□□□□ -2.19
C9orf72Q96LT7 AC115990.1-201ENST00000526957 301 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 AC022878.1-201ENST00000530684 149 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 RPL21P5-201ENST00000554662 472 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.37□□□□□ -2.19
C9orf72Q96LT7 U4.7-201ENST00000638126 106 ntBASIC1.37□□□□□ -2.19
C9orf72Q96LT7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.37□□□□□ -2.19
C9orf72Q96LT7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
C9orf72Q96LT7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 RNU6-203P-201ENST00000384038 104 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 RNU6-584P-201ENST00000410350 95 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 RNU2-8P-201ENST00000410727 190 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 RNU6-607P-201ENST00000411283 108 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.36□□□□□ -2.19
C9orf72Q96LT7 MTCO3P46-201ENST00000425787 232 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 EPS15P1-201ENST00000448836 336 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 ART2BP-201ENST00000453501 499 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.36□□□□□ -2.19
C9orf72Q96LT7 RNU6-333P-201ENST00000459117 107 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 AC130509.1-201ENST00000464158 433 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 AC104806.1-201ENST00000508720 308 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 AP005597.4-201ENST00000526762 229 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 AP003033.1-201ENST00000527244 415 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
C9orf72Q96LT7 AC087883.1-201ENST00000551882 391 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.36□□□□□ -2.19
C9orf72Q96LT7 AC008751.2-201ENST00000597885 980 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 AP001485.1-201ENST00000604799 199 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 AL034555.1-201ENST00000604816 211 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 AC018889.1-201ENST00000605372 397 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 AL451064.1-201ENST00000607718 471 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 AC099654.13-201ENST00000639774 207 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 LINC02555-201ENST00000563933 1951 ntBASIC1.36□□□□□ -2.19
C9orf72Q96LT7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
C9orf72Q96LT7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
C9orf72Q96LT7 RNU4-15P-201ENST00000362613 141 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 Y_RNA.67-201ENST00000362870 100 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 SNORD32B-201ENST00000364460 84 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
C9orf72Q96LT7 RNU6-45P-201ENST00000384471 107 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.35□□□□□ -2.19
C9orf72Q96LT7 CYCSP33-201ENST00000414485 327 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.35□□□□□ -2.19
C9orf72Q96LT7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.35□□□□□ -2.19
C9orf72Q96LT7 SDAD1P3-201ENST00000427380 333 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.35□□□□□ -2.19
C9orf72Q96LT7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.35□□□□□ -2.19
C9orf72Q96LT7 snoU13.9-201ENST00000458927 103 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 AC074344.1-201ENST00000512823 224 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.35□□□□□ -2.19
C9orf72Q96LT7 SUB1P4-201ENST00000566062 339 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 AC002400.1-201ENST00000569310 726 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 TMF1P1-201ENST00000576058 373 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.35□□□□□ -2.19
C9orf72Q96LT7 AC005786.1-201ENST00000588553 154 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 AC123912.5-201ENST00000605470 343 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 PRR13P7-201ENST00000605538 430 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
C9orf72Q96LT7 AL133173.2-201ENST00000614270 90 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 MIR7844-201ENST00000616161 122 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 AC009159.2-201ENST00000617603 606 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 Z69720.2-201ENST00000624755 279 ntBASIC1.35□□□□□ -2.19
C9orf72Q96LT7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
C9orf72Q96LT7 RNU6-37P-201ENST00000362692 107 ntBASIC1.34□□□□□ -2.19
C9orf72Q96LT7 RNU6-1285P-201ENST00000363480 105 ntBASIC1.34□□□□□ -2.19
C9orf72Q96LT7 RNU6-1214P-201ENST00000363650 109 ntBASIC1.34□□□□□ -2.19
C9orf72Q96LT7 RNU6-105P-201ENST00000363909 104 ntBASIC1.34□□□□□ -2.19
C9orf72Q96LT7 RNU6-11P-201ENST00000364234 107 ntBASIC1.34□□□□□ -2.19
C9orf72Q96LT7 SNORD115-7-201ENST00000365306 82 ntBASIC1.34□□□□□ -2.19
C9orf72Q96LT7 RNU6-25P-201ENST00000383873 107 ntBASIC1.34□□□□□ -2.19
C9orf72Q96LT7 RNU6-1-201ENST00000383898 107 ntBASIC1.34□□□□□ -2.19
C9orf72Q96LT7 RNU6-48P-201ENST00000384161 107 ntBASIC1.34□□□□□ -2.19
C9orf72Q96LT7 RNU6-36P-201ENST00000384172 107 ntBASIC1.34□□□□□ -2.19
C9orf72Q96LT7 RNU6-4P-201ENST00000384205 107 ntBASIC1.34□□□□□ -2.19
C9orf72Q96LT7 RNU6-5P-201ENST00000384238 107 ntBASIC1.34□□□□□ -2.19
C9orf72Q96LT7 RNU6-3P-201ENST00000384314 107 ntBASIC1.34□□□□□ -2.19
C9orf72Q96LT7 RNU6-16P-201ENST00000384385 107 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms