Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AC026371.1-201ENST00000551867 419 ntBASIC3.21□□□□□ -1.9
CCDC136Q96JN2 IMMP1LP2-201ENST00000552954 492 ntBASIC3.21□□□□□ -1.9
CCDC136Q96JN2 AL670379.2-201ENST00000604983 252 ntBASIC3.21□□□□□ -1.9
CCDC136Q96JN2 AC006504.8-201ENST00000621046 635 ntBASIC3.21□□□□□ -1.9
CCDC136Q96JN2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CCDC136Q96JN2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
CCDC136Q96JN2 Y_RNA.86-201ENST00000363020 111 ntBASIC3.2□□□□□ -1.9
CCDC136Q96JN2 RNU1-23P-201ENST00000363361 144 ntBASIC3.2□□□□□ -1.9
CCDC136Q96JN2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC136Q96JN2 RNU6-325P-201ENST00000411132 105 ntBASIC3.2□□□□□ -1.9
CCDC136Q96JN2 AL590632.1-201ENST00000424289 371 ntBASIC3.2□□□□□ -1.9
CCDC136Q96JN2 MTND3P9-201ENST00000429526 346 ntBASIC3.2□□□□□ -1.9
CCDC136Q96JN2 WARS2P1-201ENST00000429678 537 ntBASIC3.2□□□□□ -1.9
CCDC136Q96JN2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC136Q96JN2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC136Q96JN2 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC136Q96JN2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC136Q96JN2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC136Q96JN2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC136Q96JN2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC136Q96JN2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC136Q96JN2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC136Q96JN2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC136Q96JN2 HMGB3P3-201ENST00000510526 400 ntBASIC3.2□□□□□ -1.9
CCDC136Q96JN2 HSPE1P4-201ENST00000550617 308 ntBASIC3.2□□□□□ -1.9
CCDC136Q96JN2 MIR3672-201ENST00000584290 82 ntBASIC3.2□□□□□ -1.9
CCDC136Q96JN2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC136Q96JN2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CCDC136Q96JN2 RNU6-1141P-201ENST00000364520 107 ntBASIC3.19□□□□□ -1.9
CCDC136Q96JN2 RNU6-831P-201ENST00000384548 107 ntBASIC3.19□□□□□ -1.9
CCDC136Q96JN2 AC009161.1-201ENST00000417306 376 ntBASIC3.19□□□□□ -1.9
CCDC136Q96JN2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC136Q96JN2 RNU7-187P-201ENST00000458985 68 ntBASIC3.19□□□□□ -1.9
CCDC136Q96JN2 RPL9P9-202ENST00000466501 579 ntBASIC3.19□□□□□ -1.9
CCDC136Q96JN2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC136Q96JN2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC136Q96JN2 SNORA31.16-201ENST00000516773 139 ntBASIC3.19□□□□□ -1.9
CCDC136Q96JN2 RNU6-586P-201ENST00000517265 104 ntBASIC3.19□□□□□ -1.9
CCDC136Q96JN2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC136Q96JN2 AC107953.1-201ENST00000522216 297 ntBASIC3.19□□□□□ -1.9
CCDC136Q96JN2 AC243972.3-201ENST00000539655 198 ntBASIC3.19□□□□□ -1.9
CCDC136Q96JN2 SCOCP1-201ENST00000554676 349 ntBASIC3.19□□□□□ -1.9
CCDC136Q96JN2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC136Q96JN2 AC100830.2-201ENST00000581636 240 ntBASIC3.19□□□□□ -1.9
CCDC136Q96JN2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC136Q96JN2 AC005336.3-201ENST00000623833 2679 ntBASIC3.18□□□□□ -1.9
CCDC136Q96JN2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC136Q96JN2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC136Q96JN2 SNORD62.1-201ENST00000362541 86 ntBASIC3.18□□□□□ -1.9
CCDC136Q96JN2 RNU1-51P-201ENST00000365345 176 ntBASIC3.18□□□□□ -1.9
CCDC136Q96JN2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC136Q96JN2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC136Q96JN2 UBE2V1P4-201ENST00000425374 344 ntBASIC3.18□□□□□ -1.9
CCDC136Q96JN2 USP9YP28-201ENST00000435142 589 ntBASIC3.18□□□□□ -1.9
CCDC136Q96JN2 AC244670.1-201ENST00000436879 112 ntBASIC3.18□□□□□ -1.9
CCDC136Q96JN2 CYP2C59P-201ENST00000457790 269 ntBASIC3.18□□□□□ -1.9
CCDC136Q96JN2 AC025465.4-201ENST00000513422 638 ntBASIC3.18□□□□□ -1.9
CCDC136Q96JN2 AP005902.1-201ENST00000521358 186 ntBASIC3.18□□□□□ -1.9
CCDC136Q96JN2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC136Q96JN2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC136Q96JN2 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.18□□□□□ -1.9
CCDC136Q96JN2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC136Q96JN2 AL138726.1-201ENST00000614873 333 ntBASIC3.18□□□□□ -1.9
CCDC136Q96JN2 SNORD98-201ENST00000636377 67 ntBASIC3.18□□□□□ -1.9
CCDC136Q96JN2 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC136Q96JN2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC136Q96JN2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CCDC136Q96JN2 AC131280.1-202ENST00000624067 4211 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 SNORA51.11-201ENST00000384442 131 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 MIR144-201ENST00000384886 86 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 MIR95-201ENST00000385072 81 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AP000275.1-201ENST00000411943 390 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AL590135.1-201ENST00000422215 156 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AC019205.3-201ENST00000424573 156 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 RPL23AP95-201ENST00000426806 265 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC136Q96JN2 RPL32P28-201ENST00000443577 397 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AC016700.2-201ENST00000446011 156 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AP001486.1-201ENST00000463339 476 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 RPS29P27-201ENST00000463711 170 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AC068781.1-201ENST00000488231 618 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AC015911.1-201ENST00000495111 156 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 TRBVA-201ENST00000498804 316 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC136Q96JN2 RN7SKP132-201ENST00000516001 208 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AC060780.3-201ENST00000589464 80 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 MIR7106-201ENST00000612419 65 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AC063943.3-201ENST00000615562 356 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC136Q96JN2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC136Q96JN2 AL365361.1-201ENST00000566942 3481 ntBASIC3.17□□□□□ -1.9
CCDC136Q96JN2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC136Q96JN2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms